Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02202 ATGTCGTGGTATTACATTTTCTTTGCTCTTTCCATTCTCTCATTTCTTCTCAAGAGAAGAATAATGAGCCGTAACACTTCTACTCACACCCCTCCTTCATACCCTTTCATAGGTTGCTTTATCTCTTTCTACAAAAACCGCCACTGTCTTCTAGATTTCTACACCCACCACCTCTCCCAATCTCCAACTCAAACCATCCTCCTCAACCGTCTTGGCGCTCGCCGAACCATCTTAACTGCCAACCCTCTCAACGTTGAATACATCCTCAAAACCAATTTCACCAACTTTCCTAAAGGAAAACCCTTCACCGAAATCCTGGGCGACCTTCTAGGTGGCGGCATATTCAACGTAGACGGCAAGTTATGGTCCAATCAACGCAAATTAGCCAGCCATGAATTCACCACTAGGTCTCTCAAAGGCCTGGTTGAAAAGACCCTTGAAGATGAAGTTCAACAAAGACTTATTCCATTGCTTGAATTGGCTTCTAATTGTAACTGTGTAATTGACATGCAAGATGTTTTGAGGAGACTCACGTTTGAAATAGTGTGTAAAGTTTCACTTGGCTATGATCCTTGTTGTTTGGATTTGTCTAAACCTGTGCCCCCTCTTTTGTCCGCGTTTGACAAAGCTTCTGAAATAAGCGCAATGCGCGCAGCTTCATCAATTCCTTTGATTTGGAAGATCAAGAGGATGTTTAATGTAGGATCAGAGAAATCACTTAAAGAGGCTGTTAAACTCGTTCACGAATCTGTTATAGAGATAATAAGAAAAAAGAAAAAAGAAATGGATGAGAAAAAATATGTTAGTGGGAGTGATTTGTTGACAAAGTTGTTGGAAGGAGGGCATGATGAAATCATGGTTAGAGATATGGTTATAAGTATCGTCATGGCAGGGAGAGACACGACTTCGGCGGCGATGACATGGCTCTTTTGGTTGTTAACAAGGAATCGTAGCAAAGAGGAACTGATAGTGAAGGGAGTGAGGGAAGTTTTTGGAGGAAAAAACAACGATGATGAGTTTGAGTTGATGAGGTCTTTTGATTATGAAGGTTTGAAAGAGATGAAGTATTTGAAAGCTTGTTTGTGTGAGTCAATGAGATTGTATCCGCCAGTGGCTTGGGACTCGAAGCATGCTGCCGGCAATGACGTGTTGCCGGACGGGACTAAGGTGGAGAAAGGTGATAAGGTGACTTATTTTCCTTATGGAATGGGGAGGATGGAGGCGTTGTGGGGAAAAGATTGGAATGAGTTTAAACCAGATCGGTGGTTTGGTGAAGCTGTGAGAGAAGGGGATATTAATGGAGTTTTGAAATATGTTAGTCCTTATAAGTTTGCAGTTTTTCAGGCTGGTCCGAGAGTTTGTCTTGGGAAAGAAATGGCTTTTATTCAAATGGAATATGTTGTGGCTTCCATTCTCAACCAGTTTGAAATTAGGCCTGTGTTAGCTAACCAACCAGTGTTTGTACCTTATCTTACTGCTCATATGGCTGGTGGATTCAAAGTGAGGGTCCACAAGAGAATTTAA 1524 0.4186 MSWYYIFFALSILSFLLKRRIMSRNTSTHTPPSYPFIGCFISFYKNRHCLLDFYTHHLSQSPTQTILLNRLGARRTILTANPLNVEYILKTNFTNFPKGKPFTEILGDLLGGGIFNVDGKLWSNQRKLASHEFTTRSLKGLVEKTLEDEVQQRLIPLLELASNCNCVIDMQDVLRRLTFEIVCKVSLGYDPCCLDLSKPVPPLLSAFDKASEISAMRAASSIPLIWKIKRMFNVGSEKSLKEAVKLVHESVIEIIRKKKKEMDEKKYVSGSDLLTKLLEGGHDEIMVRDMVISIVMAGRDTTSAAMTWLFWLLTRNRSKEELIVKGVREVFGGKNNDDEFELMRSFDYEGLKEMKYLKACLCESMRLYPPVAWDSKHAAGNDVLPDGTKVEKGDKVTYFPYGMGRMEALWGKDWNEFKPDRWFGEAVREGDINGVLKYVSPYKFAVFQAGPRVCLGKEMAFIQMEYVVASILNQFEIRPVLANQPVFVPYLTAHMAGGFKVRVHKRI 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02202 507 PRINTS E-class P450 group IV signature 454 472 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g02202 507 PRINTS E-class P450 group IV signature 354 370 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g02202 507 PRINTS E-class P450 group IV signature 405 423 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g02202 507 PRINTS E-class P450 group IV signature 388 402 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g02202 507 PRINTS E-class P450 group IV signature 288 314 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g02202 507 PANTHER CYTOCHROME P450 21 501 - -
Vifa2g02202 507 CDD CYP86A 71 499 - -
Vifa2g02202 507 Gene3D Cytochrome P450 14 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g02202 507 SUPERFAMILY Cytochrome P450 29 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g02202 507 FunFam Cytochrome P450 21 507 - -
Vifa2g02202 507 Pfam Cytochrome P450 31 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g02202 507 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g02202 507 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g02202 507 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g02202 507 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02202 Vifa-Chr2 572294605 572296128 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02202 1 506 Cytochrome P450 AT3G48520 59.055 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02202 K20665 - gmx:100797785 666.766