Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02188 ATGTGCAAATCTGAAAACCTTTTCAAGTACACTGGAATGGATTCCTTGAAAATGCTCATTCTATCTGATTGCTCAAACATTTCAAGACTTCCTGAATTTGGAAAAAATATGATAAGCATGTCAGTGCTTAATTTAATGCATTGCAAAAATATTATGTGCCTTCCAAACAGCATTAGTAACCTGAAGTCTCTCAAAATTCTCAATATATCAGGATGCTCAAAAATGTGTAGCCTGCCAGACGGTATAAAGCAAAACACGACTTTGGAGGATCTTGACTTGAGTAGAACTGCTATTGGAGAAATGGATTCCTCCCTACTTCAATTAAGGAATCTCAAAATATTATCTTTAAGTGGATGTGGTTTGCCAGCTTCTGACTCTAGACGGGACGTGAGTCGGCCATATAGGGATCAGTGGGGGGATCAGTTCAGGTATTTCTCAGCTGACACAGGCTTAATATTGCATTCTACTTTCTCAGGTCTTTCCTTATTAACTGTTTTTGATTTGAGCTATTGTAATATCACTGATGATTCAATTCCCCATGACATTGATGGCTTATTATCACTGGAGAGACTGATTCTATCAGGGAATAAATTTCTGCACCTACCCACTTGCTACTTTGTTAAACTTTCAAAGCTTCGATATCTTGAATTGGAAGACTGTCCTCAGCTTCAATATGAACCATTGCTTCCACCACATTTTCTTAATCTTTCAAAGTTTCACTATCTTGAAATGGAAGACTATCCTCATCTTCATTCTATGGGATGGCTTTCACCACATGTATGCTTTTACTCAATAGATACTGATAGGAAGAAATCTAAATTATTAGATCCTAAAAAGATATGGAAGCTGTTTGAATCATTCAACAAAGAACTCTTTCTCTCACCCGTGTTGTTGATAGATGATTACCCTTATCCTGTGTACACGGAAATCCCTTCGAGATTTGATAATCATAATTTTTTCCCCTTGAGCTCATCATATGTGTCAGAAGCTGACTCAATTGCATCAATAACAGTAAAGATCCCTACTGGTTTTCGTTCAAATAATAGGTGGGCAGTTGTTGTATTTGTGGCCTTGGAGGAAATTGATGAAGGCTTTCAGGCCCGAGTAAAGCTGCTTCACAATACCAAACCAGATTTGGAACCTGAAGATGGCTCATCCTTATCTCTCTTCTCTAGTTCAATAGCAAACAATAAACTTTACCTGTTCACAATGGTAAGGAGTGGTGATTTTATATACATTTGGCGACACATAAGAGGGGAGGGAACGTCCGAGCTCAGATCCTTTAGCAAGCATCGGAAGCCAGAGTTCAGGGAAAACAGTTTGTTGCGTTTTGAAGTGCAAGTGGAAGGGTGCAAGATAAGGAAGTGTGTAGGGCGTGTGGTTCACAAGGAAGATTATCTTGAAGACTTTAAAGAGGTGAACAACGGTGAACTTTCTATGGAACCTTCAAATTCCGAGCATATCAGTGGTATGTGTGAATCAACTGTGGATGAATTAAAGGGAGAGAATGCTACTGCTTTTGATGTGCAGAACATAGAAAAATCTAATGAAAATTTCTTTCTCGGAAAAATGTTTCAGAATATTAGACAAGGAATAGGTTTAAGCATACTAATTTTAATGTCAATGATGGTAGCTGCTACATTATTCCCTCTGCCTGTGCAAGGTTTCTGCTTTAAAAAGCACACCACAACAAATGAACTCCAGAGTAAACCATTTAAATCACATCGGGTTTCCCACAAAACTGTATTGAAGATTGTCTTTCAAGTGGCTGGTGGGGGGAGGCTGTACTTGTGGCACTTGTGTTGGAAATTTGATACTCTAGGACCTGAAGATAGCCCTTCCTTATCAATGTCTGCCAGTTCAACAGCATATAGCGATCTCTACCTCGTCACAATGGTAGTGAGTGGTGATTTTACATACATAGAGAGACACCGAAGGGAGGACCGAATCATCGTAACAGAAATGTGA 1968 0.3897 MCKSENLFKYTGMDSLKMLILSDCSNISRLPEFGKNMISMSVLNLMHCKNIMCLPNSISNLKSLKILNISGCSKMCSLPDGIKQNTTLEDLDLSRTAIGEMDSSLLQLRNLKILSLSGCGLPASDSRRDVSRPYRDQWGDQFRYFSADTGLILHSTFSGLSLLTVFDLSYCNITDDSIPHDIDGLLSLERLILSGNKFLHLPTCYFVKLSKLRYLELEDCPQLQYEPLLPPHFLNLSKFHYLEMEDYPHLHSMGWLSPHVCFYSIDTDRKKSKLLDPKKIWKLFESFNKELFLSPVLLIDDYPYPVYTEIPSRFDNHNFFPLSSSYVSEADSIASITVKIPTGFRSNNRWAVVVFVALEEIDEGFQARVKLLHNTKPDLEPEDGSSLSLFSSSIANNKLYLFTMVRSGDFIYIWRHIRGEGTSELRSFSKHRKPEFRENSLLRFEVQVEGCKIRKCVGRVVHKEDYLEDFKEVNNGELSMEPSNSEHISGMCESTVDELKGENATAFDVQNIEKSNENFFLGKMFQNIRQGIGLSILILMSMMVAATLFPLPVQGFCFKKHTTTNELQSKPFKSHRVSHKTVLKIVFQVAGGGRLYLWHLCWKFDTLGPEDSPSLSMSASSTAYSDLYLVTMVVSGDFTYIERHRREDRIIVTEM 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02188 655 Pfam Leucine Rich repeat 163 176 IPR001611 GO:0005515
Vifa2g02188 655 Gene3D Ribonuclease Inhibitor 87 291 IPR032675 -
Vifa2g02188 655 SUPERFAMILY L domain-like 12 266 - -
Vifa2g02188 655 Gene3D Ribonuclease Inhibitor 2 86 IPR032675 -
Vifa2g02188 655 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 8 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02188 Vifa-Chr2 567829678 567832797 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02188 3 114 WRKY Transcription Factor Family AT4G12020 33.333 4.95e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02188 - - psat:127083448 877.085