Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02162 ATGTCTTTTTCATTGCTAGTTGTTGATTTCACCAATGGCATGTTCCCTCCCTCTAAAGATATTTGTAGTGATTCTGAAAAGGCTTTGGCATCTGACTTGGTGAACAAAGCAATGAGGTTTCATCCTTCAATTGTACTTCAGTTAGTGACAAAAAAAACTCTTGAAATATTGCTAGGAAGAAGCAGTTTGTTCATAGCTTCCAGAGGTGTCAACTTTGTTAACGAAATAACTCCTGCAAAGGAGTCATGGAACATTGATGTCCGAGTTGTCCGCTTATGGTTCGTACCAGACATGAATGTGAAACAAAAATATTTTGCTATGGAAATGGTTCTCATGGATGATAAGGGTGACAAAATCCAAGCTTCAATTAGAAAAGCCTTGCTGTCTCGATTTGAAAATAAAATTAAGGAGGGATCTTCGTATAATTTCAAGTCATTTGGTGTCACTGCTAATACTGGAGCATTTAGGACTACGAAACACCAGTTTAAATTGAATTTGCAGAATGGCATGATTGTCACAGATGTTGGAACCAGAATTACAACATTATCGCCTTATTCGTTTGTATCTTTTACAAATATTCTTGGCAACATAGATATGGACTACTTGATTGATGTTATTGGTATTTTGTCTTTTGTTGGTCGTGAAAAGGTGTATGAAAGGAATCGTGTAGCTACTAAATTTAAAGTTATTGAGTTGGAATCCAATGGAATTAAGCTTGAGTGCACGCTATTTTGA 735 0.3605 MSFSLLVVDFTNGMFPPSKDICSDSEKALASDLVNKAMRFHPSIVLQLVTKKTLEILLGRSSLFIASRGVNFVNEITPAKESWNIDVRVVRLWFVPDMNVKQKYFAMEMVLMDDKGDKIQASIRKALLSRFENKIKEGSSYNFKSFGVTANTGAFRTTKHQFKLNLQNGMIVTDVGTRITTLSPYSFVSFTNILGNIDMDYLIDVIGILSFVGREKVYERNRVATKFKVIELESNGIKLECTLF 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02162 244 SUPERFAMILY Nucleic acid-binding proteins 73 172 IPR012340 -
Vifa2g02162 244 CDD RPA1_DBD_A_like 87 172 - -
Vifa2g02162 244 Pfam Domain of unknown function DUF223 108 195 IPR003871 -
Vifa2g02162 244 Gene3D - 69 174 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02162 Vifa-Chr2 561892966 561894754 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02162 67 212 Core DNA Replication Machinery Family AT5G08020 22.819 9.56e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02162 - - cam:101506735 191.045