Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02134 ATGAAGAAGGTTTCTCTTTATGCTTGTTTATTACTCAACTTTAGTCTTTTGGTCATTTTTCCATATAGCAAAGCTAGTCAAGCTGATAAACTTGATGAGTTGATTCTGTCTAGAAGCTCACAGAATCCTCCTAAAACTTTTACATGGGAAGCTGAAGATGCATTGAAAACACAGTCTTCTTCTGCTTATGTTGTACCTCCTCAAGAGGAGCAAAGACTAGCCGACAAGATTGTCACATTGCCTGGTCAACCCTATGGAGTGAATTTTGATCATTACTCAGGCTATGTCACCGTTGATCATGAGACTGGAAAAGAACTTTTCTATTATTTTGTGGAGTCTCCCTCTAACTCTTCCACTAAACCTTTAATATTGTGGCTTAACGGAGGACCTGGTTGTTCATCACTGGGGTATGGAGCCTTTGAGGAGCTAGGACCCTTCAGAATCAACTCTGATGGAAAAACACTATACCGTAATCCATATGCTTGGAATGAAGTTGCAAATGTACTCTTCTTGGAATCTCCAGCAGGAGTAGGCTTTTCCTACTCAATCACAACTTCTGACTATGACAAATCAGGAGATAAGACAACTGCAAAGGATGCTTATGTCTTCCTTATCAACTGGCTGCAGAGGTTTCCACAGTACATAACAAGAGATTTTTACATAACTGGAGAGAGTTATGCTGGTCACTATGTTCCTCAGCTTGCATCCACTATTCTTAACAGCAATAAACTCTATAACAAAACCATTATTAACCTCAAAGGAATTTCTATAGGAAATGCTTGGATTGATGATGCTACAAGTTTAAAAGGGCTATTTGATTACTTATGGACTCATGCTTTGAATTCAGATCAAACTCATGAGTTGATTGACAAGTACTGTGACTTCACTTCTGAAAATGTTTCAGCAATATGTGCCAATGCAACCGCAAAGGCCTTAATAGAGAAAGGAAACATAGATTTCTATAACATCTATGCTCCACTTTGTCATGACTCTTCTCCCAAAAATGGTTCAACTGGTTATGTAAGTAATGAGTTTGACCCTTGTTCTGATTACTATGGTATTGCCTATCTAAATACACCAGAGGTTCAAAAGGCTCTTCATGCAAAACCTACAAATTGGACACATTGCACTCGTGTTATTCATACCTGGAAAGACAGCCCAGTTACCATCCTTCCCACCATCAAGTACCTCATCGACAGTGGCATTAAATTATGGATATACAGTGGTGATACAGATGCAAGAGTTCCAGTTACATCTTCAAGATATTCCATCAATACTCTTAAGCTTCCTATCAACTCCGCTTGGCGTCCATGGTATTCCGGAAAAGAGATTGGAGGATATGTTGTGGGATACAAAGGTTTGACATTTGTTACAGTAAGAGGAGCGGGACATCTTGTTCCAAGCTGGCAGCCGGAACGAGCTTTGACTTTGATCTCGTCATTCATCTATGGAATTCTGCCTCCTGTTTCACCATCTAATTAA 1482 0.3954 MKKVSLYACLLLNFSLLVIFPYSKASQADKLDELILSRSSQNPPKTFTWEAEDALKTQSSSAYVVPPQEEQRLADKIVTLPGQPYGVNFDHYSGYVTVDHETGKELFYYFVESPSNSSTKPLILWLNGGPGCSSLGYGAFEELGPFRINSDGKTLYRNPYAWNEVANVLFLESPAGVGFSYSITTSDYDKSGDKTTAKDAYVFLINWLQRFPQYITRDFYITGESYAGHYVPQLASTILNSNKLYNKTIINLKGISIGNAWIDDATSLKGLFDYLWTHALNSDQTHELIDKYCDFTSENVSAICANATAKALIEKGNIDFYNIYAPLCHDSSPKNGSTGYVSNEFDPCSDYYGIAYLNTPEVQKALHAKPTNWTHCTRVIHTWKDSPVTILPTIKYLIDSGIKLWIYSGDTDARVPVTSSRYSINTLKLPINSAWRPWYSGKEIGGYVVGYKGLTFVTVRGAGHLVPSWQPERALTLISSFIYGILPPVSPSN 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02134 493 ProSitePatterns Serine carboxypeptidases, histidine active site. 454 471 IPR033124 GO:0004185
Vifa2g02134 493 ProSitePatterns Serine carboxypeptidases, serine active site. 221 228 IPR018202 GO:0004185
Vifa2g02134 493 Gene3D - 390 484 - -
Vifa2g02134 493 Pfam Serine carboxypeptidase 81 483 IPR001563 GO:0004185|GO:0006508
Vifa2g02134 493 Gene3D - 348 382 - -
Vifa2g02134 493 FunFam Carboxypeptidase 71 330 - -
Vifa2g02134 493 Gene3D alpha/beta hydrolase 72 330 IPR029058 -
Vifa2g02134 493 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 77 471 IPR001563 GO:0004185|GO:0006508
Vifa2g02134 493 FunFam Carboxypeptidase 390 484 - -
Vifa2g02134 493 SUPERFAMILY alpha/beta-Hydrolases 75 486 IPR029058 -
Vifa2g02134 493 FunFam Carboxypeptidase 347 485 - -
Vifa2g02134 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 181 IPR001563 GO:0004185|GO:0006508
Vifa2g02134 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 454 467 IPR001563 GO:0004185|GO:0006508
Vifa2g02134 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 170 IPR001563 GO:0004185|GO:0006508
Vifa2g02134 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 207 232 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02134 Vifa-Chr2 551263127 551265221 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02134 345 484 Calmodulin-binding Proteins AT2G22960 30.872 7.96e-14 68.2