Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02077 ATGTCAACTCCTATAGCAATGGCTGTGGTTGCTACAGCCATATCTATGTTATTCCTTTTTGGGATTTTCCTTTACTTCTACCACAAATTTTTTCTTGCTAGATACCAAAAAGTTTCTAGTAAAGGTAGTTTTGTTCATGAGGCAGATATAAAAAGATTTGGTGGTAATGTGAAAGGAGTAATTGCTGATGAAAATGGTGTTGATGTTATTTATATGATGGACAAAGAAAGTAGGCAAATGATAACTAGTTTTCCAAATTGTATGTTTAATCCTAGTTATGAAGATGATGTAGAAAAAGAAAAGATTATAGATGTTTTGGTTCATAGGTCAAAAATATCTAACCCTCATCATGAGGTTCCATTTTCATGTGAATCTCCACTACCAATGAATCTTGACAAGAACAAGATTCACATGAGTTACAATCAACCATTACCATCTCCTCCTCCATCTCCGCCTCCGCCTCCGCCTCCGCCTCCGCCACCGCCAGCTCCTCCAAAGAAAGTAATTCTAAAGGCACCACTTCCACCAGGTCCACCTCCACTTCCAAAGGCTAGTGGTTTTCCATTCATGAAACCACCACCAGCACCTAAAGGAAAATCAAACATGAAAGAGGGTATGATAGGAGAGAGCTCAAGAGAGAAAAGTGGTGGACAAACAAGGCTAAAGCCTCTACATTGGGATAAGGTTATAGCTGATGTTGATCATTCAACTGTTTGGGATCAGATCAATGATGGATCTTTTAGGTTTGATGATGAACTCATGGAATCACTCTTTGGATATTCAACCAGATATAAAACTCAAGAAAGAAACAAGTCTCTTTCCATTCTGGCCAAGACCAATTCCAACACACCAACTCAAATATTCATCCTTGAGCCAAGAAAATCTCAAAACACTGCAATTGTACTGAGATCACTAGCAGTTTCTCGGCGCGAAATTCTGGACGCAGTACTTGATGGTCAAGAACTCAGCGTTGAGACACTAGAAAAACTCACTAAAATAGCTCCCTCTCAAGAAGAAGCATCCAAAATTGTCCAATTCAGTGGTAACCCGAATAACCTCGCAGAAGCCGAGTCTTTCCTATACTACATCCTTAAAGCAGTTCCAACATCATTCATCCGTTTAAAAGCAATGCTTTTTAGATCGAACTATGATAGCGAAATTCTTCAGCTTAAGGAACACTTACAAACACTTGACTTGGCTTGCAAGGAACTTAAAACTAGCAGTCTGTTTTTGAAACTCCTCGAAGCCATTCTCAAAACTGGTAACAGAATGAATGCAGGAACTTCAAGAGGCAATGCACAAGGCTTCAACCTAAGTGCTCTTACAAAACTTTCTGATGTAAAAAGCACAAATGGTAAAACTAGTTTGCTTCACTTCATAGTGGAACAAGTAGCTCATTCTGAAGGGAAAAGACAAGCTATCTTTGAAAGTGAAAAAGAATATCTAATTCTTGGTTTACCAGTGTTAGGTGAACTAAGTGATGAGTTATCAGAAGCAAAAAAAGCAGCTAGCATTCACTACCATAGTTTCATCACTATGTGTTCAACTCTAATTTCTCATGTTACTGAAATTAGACACATAATAACATGTTGTGGAAACACTGAGAAAAGTGGATTCATCAATGACATGAAAGGATTTCTAGAGTTATGTGAGGAGGAACTTAAGGTTGTGAAAGAGGAACAAACAAGGATAATGGAACTTGTGAAGAAAACAAATGAGTACTATCTAGCAGGAGCATTAAAAGACAATAAGCCTAATCCTTTTCATTTGTTTGTTATTGTGAAAGATTTTGTTGACATGGTAGGTCAAACTTGCATTGAACTAAAAAAGAAGGTTGAAAAGAAGAATGTAGGAGTAGAGTTTGGATCAACAACACCACCTTTGTCTCCACCAAAGATGGTGCCACTGAGATTCTCTAACTTTGATTTGAATTTTATGTCAAATAGGTCAGACTCTAGATTTTCTAGCCAATCAGAAGATGGTTTTTGA 1989 0.3776 MSTPIAMAVVATAISMLFLFGIFLYFYHKFFLARYQKVSSKGSFVHEADIKRFGGNVKGVIADENGVDVIYMMDKESRQMITSFPNCMFNPSYEDDVEKEKIIDVLVHRSKISNPHHEVPFSCESPLPMNLDKNKIHMSYNQPLPSPPPSPPPPPPPPPPPPAPPKKVILKAPLPPGPPPLPKASGFPFMKPPPAPKGKSNMKEGMIGESSREKSGGQTRLKPLHWDKVIADVDHSTVWDQINDGSFRFDDELMESLFGYSTRYKTQERNKSLSILAKTNSNTPTQIFILEPRKSQNTAIVLRSLAVSRREILDAVLDGQELSVETLEKLTKIAPSQEEASKIVQFSGNPNNLAEAESFLYYILKAVPTSFIRLKAMLFRSNYDSEILQLKEHLQTLDLACKELKTSSLFLKLLEAILKTGNRMNAGTSRGNAQGFNLSALTKLSDVKSTNGKTSLLHFIVEQVAHSEGKRQAIFESEKEYLILGLPVLGELSDELSEAKKAASIHYHSFITMCSTLISHVTEIRHIITCCGNTEKSGFINDMKGFLELCEEELKVVKEEQTRIMELVKKTNEYYLAGALKDNKPNPFHLFVIVKDFVDMVGQTCIELKKKVEKKNVGVEFGSTTPPLSPPKMVPLRFSNFDLNFMSNRSDSRFSSQSEDGF 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02077 662 Pfam Formin Homology 2 Domain 216 601 IPR015425 -
Vifa2g02077 662 FunFam Formin-like protein 218 613 - -
Vifa2g02077 662 MobiDBLite consensus disorder prediction 137 219 - -
Vifa2g02077 662 SMART it6_source 211 616 IPR015425 -
Vifa2g02077 662 MobiDBLite consensus disorder prediction 142 195 - -
Vifa2g02077 662 Gene3D Formin, FH2 domain 234 618 IPR042201 -
Vifa2g02077 662 PANTHER FORMIN-RELATED 5 617 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vifa2g02077 662 SUPERFAMILY Formin homology 2 domain (FH2 domain) 152 615 - -
Vifa2g02077 662 ProSiteProfiles Formin homology-2 (FH2) domain profile. 211 627 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02077 Vifa-Chr2 538391946 538394623 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02077 5 660 FH2 protein (formin) Gene Family AT1G70140 40.972 5.06e-150 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02077 - - tpra:123885767 942.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02077 2 538391946 538394623 Vifa2g02077 2 538391946 538394623 ECH