Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa2g02069 | ATGGATGCTCTATCATCTTCTGCATTGTCACTCTTTCAAGACTTCATTCCACTACTCATAGCAATACTAGTTCTTCTTGTTGCCACCATCTTCTTCTTAATAATCTGTTACCAATGGCTCAAATACCGAACGGTCTTCCTTCCCTCTTCCTCCGGCGATGTCAGTGATTTAGCGCAACCAACAACGGCGTTCCGCCGCCACACACATGGTTTAGGCGAGTCAGTTATAAACACAATTCCATCGTTAATCTACTGTACTAACAGTGAGCAAAAAGAATCTCCACGTGATTGTGCTGTTTGCTTGGTTGAATTTAAACAAGAGGATCGCGTTCGTACTCTTCCTCTTTGTTCTCATACGTTCCATATCCATTGTATTGATACCTGGCTTCGTTCACACCCTAACTGTCCTCTTTGTCGCTCATGTCTTAGCTGTGGTATGTCAGAGTCGTCTTTCAGACCTCTCATGTCCGACAGAATCCGCCCCTCTGTTGTTACATCGGTGACGGAGATCACCCTCCTCACTTTACCGACACGAGGATCAGTTTAA | 546 | 0.4487 | MDALSSSALSLFQDFIPLLIAILVLLVATIFFLIICYQWLKYRTVFLPSSSGDVSDLAQPTTAFRRHTHGLGESVINTIPSLIYCTNSEQKESPRDCAVCLVEFKQEDRVRTLPLCSHTFHIHCIDTWLRSHPNCPLCRSCLSCGMSESSFRPLMSDRIRPSVVTSVTEITLLTLPTRGSV | 181 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa2g02069 | 181 | Pfam | Ring finger domain | 96 | 139 | IPR001841 | - | |
Vifa2g02069 | 181 | ProSiteProfiles | Zinc finger RING-type profile. | 97 | 139 | IPR001841 | - | |
Vifa2g02069 | 181 | SMART | ring_2 | 97 | 138 | IPR001841 | - | |
Vifa2g02069 | 181 | PANTHER | RING-H2 FINGER PROTEIN ATL16 | 19 | 147 | IPR044600 | GO:0016567|GO:0016740 | |
Vifa2g02069 | 181 | SUPERFAMILY | RING/U-box | 86 | 144 | - | - | |
Vifa2g02069 | 181 | FunFam | E3 ubiquitin-protein ligase ATL6 | 59 | 144 | - | - | |
Vifa2g02069 | 181 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 59 | 144 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa2g02069 | Vifa-Chr2 | 537948765 | 537949310 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa2g02069 | 69 | 163 | C3H Transcription Factor Family | AT3G18930 | 54.630 | 3.24e-28 | 107 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa2g02069 | - | K19041 | psat:127080038 | 191.815 |