Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa2g02059 | ATGTTGAAATCCCTCAAACGTGGCGAATCGTCTCTTAAAGTGGATGTTTCTTCATCTCCGTCTTCGTGGTCTGCCAAGTCCTTCACTAAGGACGGTCGAATAATTAGTGTTGGTGACTGTGCTCTCTTCAAACCATCAAAAGATCGCCCACCTTTTATTGGAGTAATTCGTAGTTTGACACTTGGTAAAGAAAGTAAATTAAAGTTAAGTGTTAATTGGCTTTATCGGTCCATTGAAGTAAAACTCAGCAAAGCAGAGCCCTTGGAGGCTGCTCCCAACGAGATTTTCTACTCCCTTCATAAGAGTGAGATTGATGCTGAATTGCTAATCCATCCTTGTAAAGTTGCATTCCTTCCTAAAGGCGTCAAACTTCCTGAAGGGATTTCATCATTTGTGTGTAGAAGGGTTTATGACACATCGAACAAGTGTTTAAGATGGCTAGATGATCAAGAGTATCTTAACGAATGCCAAGTACATAAGTTGGTATATAAGACTTGTGTAGAAATGAATGCAACAATTCAAGCAGGCGGTCGATCTCCTAAGCCAATGAGTAGCCCAACATCAACATCACAGGTGAAATCAGTTTCAGATAGTGTGCAGAACAGTACTTCATCCTTTCCTTCTCATGTTAAGGGGAGGAAAAGGGATAGGGTAGAGCAGGGTTCTGAGCCCATCAAGCGAGAGCGTTCAATAAAAATTGAGGATGGACATTCTAGTAATTTTAGGCATGATAACAGTTTGAAGGCAGAGATATCCAAAATTACAGAAAAGGGAGGGCTTGTTGATGCTGAAGGAGTTGAAAAGTTTGTGCAGCTGATGCTTCGTGATAGAAATGAAAAGAAGATAGATTTAGCTAGCCGGTCATTGCTTGCAGCCGTTATTGCAGCAACAGATAGATTGGATTGTCTTAGTCAGTTTGTGCAGCAGAGGGGTTTACCTGTATTTGATGAATGGCTCCAAGAGGTCCATAAAGGAAAGAACAGTGATGGTGCTGTGTCTAGGGATGGTGATAAATCCGTTGAGGAATTTCTCTCAGTATTACTTCGGGCACTTGATAAGGTCCCGGTCAATCTACAGGCTCTAAAAATGTGCAACATCGGTAAATCTGTGAATCATTTGCGAACCCATAAAAACTTTGAAATTCAGAGGAAAGCAAGAGGTTTAGTTGACACATGGAAGAAACGTGTTGAAGCTGAAATGAATATAAAGGATGGAAAGTCTGGTTCTGGTCCCAGTTCCCCGTGTCCTGCCAAATCACGGGTTGCTGATGTTGGTCAAGGTGGGAATAGACATTCAGGCGTGTCATCTGATGTTGCCATGAAGAGTTCAGTTACACAGATTTCTACATCTAAAACTTCTTCCTTGAAGATTGTCCAGGGTGAGAACACACCTAAATCTGCATCAACATCTGCATTTCCAGGACATGCTAAATCAGTGCCTTCGCCTGTATCTGCAATTACGAACTTAAAAGATGGACAGCCCCATGTTGCCGCTGTCAATGGCAGTTCTGATATTCCTATTGCCAATGCAAAGGATGAGAAAAGTAGTAGTTCTAGTCAATCTCACAACAGTCAATCTTACAATAACAGTCAATCTTGTTCTAGTGACCATGCTAGAACTGGGGGTCTTTCAGGGAAGGAGGATGCCAGAAGCTCTACTGCAATGAGTGCAAACAAGTTATCAGGTGGCTTTTCACGGAATCGGAAATCTATCAATGGACTCCTAGGTTCAACTTCATCCAAAGGGAAAAGGGAAAGTCGGTCAAGTAGGAAGTCCTCCTTGCACAAAAGTTTAACTTCAGAGAGAAAATCTCAATCTGGGTTAATTGAAAAAGCACTTGATAAAATTTCTCATGAAGGGAATACTCCCAAGCTAGTTGTTAAAATTCCAAACCAAGGTAGAAGTCCTGCTCAAAGGGCCAGTGCTGGTTCTTTTGATGAACCTACAATCATGAATAGTAGAGTCGCTTCTCCTGTTCTCTCAGAGAAGCATGATCAGTTTGACCATGGTTTAAAGGAAAAGAGTGACTTTTATCGAGTCAATATTGGCTCTGATGTTAACTCTGAATCTTGGCAGAGTAATGATTTTAAAGATGTATTGACTGGCTCTGATGAAGGCGATGGATCCCCTGCTGCAGTTACTGATGAAGAGCACTGTAGGACTGGCAATGATTGTAAGAAAACAGATGAGGTATCAAAAATTGCTTCCTTGTCATCTGGAAACGGAAACAAAGCTAGGAATTTGCAGGATGCTTCTTACAGTTCCATAAATGCTTTAGTTGAAGGTGTTAAGTACTCTGAAGCTGATGATGTTGGAATGAATCTTCTTGCTAGTGTGGCTGCTGGAGAGATGTTGAAATCTGAATTATCGACTCCAACTGGGTCTCCAGAACGAAAAGCTACTGCTGTTGAACAGTTGTGCACAAGCAACGCTGCAGTTAAGCCCTCTGAAGAAAATATTGTGCGGGATGAATGCCACTCAAATAATAGTCTTGATGCTGAAGATAAAAAACATGGTTCTATATCTGGTGAGATGAATGATGATAATGATTTTGATTGTCCGGCATCTGGAGGAAAGGCTATTGGTGAGCTAGATAAACCTGTTAATGCACTTAGTAAGGATTTGCAGCATGTTACAGAAACTATTCAAACTGGATTAGAAAGGAAGGGGATATCAATTGAAAAGTCTGTTCCTGCTTCATTGCGCGCACTTCCTGGATTGCAAGAGGCTAGGGATTTTAACTGTAGTAAGCAGCTCCGAGAAGAGGTTGTGAGAGGAGTGAATGCTGGTGAAACTCTTGGTATTAAGGTAAGTGGCGTTGCTGGAGTTGAGGTGGAAGCAATTGACAAATCGTTTCACACATCTGTGGAAGTGGATGTAAATGGTGATCACAGTGCTGAACGATCAGGCGCCGACAGACTGACGACTCAAAATTCTCCCACTGTTCACAGACAATCTGATTCAGCTAAAGGAACAGATGATGATGTACTCCTTTCTCGTGGTGTTGATAAGGTTCCTGAAGACTTCAATGAACGGGAGCACGGAAAAAACAGCGATATTGCTGCCGGCAACCATGCTAATGAGGCTAAAATGCTAAGAACTGAGCGTGGACATGTTGTCTTGGCTATGCCTGCGAAAAGTGGTTTGTGTTCTAGTGCAACTGATTTTTCTGCTGAACGTGTGGAGGAAAATTCAGATATAAAAGAGGTTCATGACCAAGATGCTGGACAGAGGCTTCACAAAGCATCATCTAGCTATCTTTCACAAGAAATGGATAAGCAACTGGATTCTAAAGGATCAAAACCGAATGCCATTGAAGCAGAAGAGGCTGAGGAGTGCACCTCTACCACGGCGGATGCTTCTTCCATGTCTGCTGCTGCTGTGTCAGATGCAGATGCAAAGGTTGAATTTGACTTAAATGAGGGGTTCGGTGCCGATGATGGAAAGCGTGGTGAGTTAAACAGCATTGCCACATCTGGGTGTGCTCCTTCTGTTCGATTTATTAGTCCTGTACCATTTTCTGCTTCATCTTTGTCTTACGGTATTCCTGCATCAATCACCGTGGCTGCTGCTGCAAAAGGCCCCTTCATGCTGCCTGAGAATTTATTGAGAAGTAAAGCGGAACTTGGTTGGAAGGGGTCAGCTGCTACTAGTGCATTCCGGCCAGCCGAGCCCAGGAAAGTTATGGAAACATCGCTTGTTACACTAACCACCCCTAATCCTGATACTGCCGCTGGAAAGCAGAGTCGACTACCATTAGATATTGACTTGAATGTGGCCGATGAAAGAATACTAGATGATATTTCTTCTCCATCTTGCGCTCGTTACATGAATATTGCATCTCTTGAAGCCAATGGTTACAATCCAGTATGCAGTAAGATGGCCTCACCTGTTCGGTGCTCTGGTGGTCTTGGACTTGACTTAAACCTAATGGATGAAGCTTCTGACATCGGTAATTGCTCTGCAAGCAGTAGTTATAAGATAGATGTACCTCACATGCAGGTGAAATCATCATTGGGTGGCCGTTCAAATAGAGAAGCGAGTGCCCACAGGGACTTTGATTTGAATAATGGACCTTCAGTTGAGGAAATCACCATTGGACCGTCACTGCTCTCTCAGCATGCCAGGAGCAGTGTGCTAACGCAACCATCTGTTTCTGGACTTAGGATGAGTACTGCCGAGCTAGGTAACTTTTCTTCATGGCTTCCTTCCAGTGGCAACACCTATTCTGCTGTCACGATATCTTCAATTATGCCTGATAGAGGGGATCAGCCCTTTTCAATTGTTGCCCCTAATGGATCACAAAGATTATTGAGTCCTGCCACTAGTGGCAACCCATTCGGAACTGATATTTATAGGGGGCCAGTATTGTCATCTTCTCGTGCAATGCCATATCCATCTGCTCCATTCGAATACCCTGTTTTCCCTTTTAATTCCAGCTTTCCTCTTCCATCATCGTCATTTTCTGCTGGATCGACTACCTTTGTGTATCCAACATCAGGAAGTCGACCTTGCTTCCCTGTGGTAAATTCACAGTTGATGGGGCCTGCCAGCACAGTTTCATCTCATTATCCCAGGCCTTATGGTGTTGGCCTTCCAGAAGGTAGCAGTAGTACTAGTGTTGAGACCAGTAGGAAATGGACAAGACAGGGCTTAGATCTTAATGCTGGACCTGGAGGTTTAGACATAGAGGGGAGAGATGAAATCTCACCTCTGGCATCAAGGCAACTCTCTGTTGCTAGTTTGCAGGTCCTAGCCGATGAGCATGCAAGGATCCATCTGGCTGGTAGTGTCCTTAAGAGGAAGGAGCCTGATGGTGGGTGGGATGGCCACACCAAAAATTCCTCATGGCAATAG | 4857 | 0.4355 | MLKSLKRGESSLKVDVSSSPSSWSAKSFTKDGRIISVGDCALFKPSKDRPPFIGVIRSLTLGKESKLKLSVNWLYRSIEVKLSKAEPLEAAPNEIFYSLHKSEIDAELLIHPCKVAFLPKGVKLPEGISSFVCRRVYDTSNKCLRWLDDQEYLNECQVHKLVYKTCVEMNATIQAGGRSPKPMSSPTSTSQVKSVSDSVQNSTSSFPSHVKGRKRDRVEQGSEPIKRERSIKIEDGHSSNFRHDNSLKAEISKITEKGGLVDAEGVEKFVQLMLRDRNEKKIDLASRSLLAAVIAATDRLDCLSQFVQQRGLPVFDEWLQEVHKGKNSDGAVSRDGDKSVEEFLSVLLRALDKVPVNLQALKMCNIGKSVNHLRTHKNFEIQRKARGLVDTWKKRVEAEMNIKDGKSGSGPSSPCPAKSRVADVGQGGNRHSGVSSDVAMKSSVTQISTSKTSSLKIVQGENTPKSASTSAFPGHAKSVPSPVSAITNLKDGQPHVAAVNGSSDIPIANAKDEKSSSSSQSHNSQSYNNSQSCSSDHARTGGLSGKEDARSSTAMSANKLSGGFSRNRKSINGLLGSTSSKGKRESRSSRKSSLHKSLTSERKSQSGLIEKALDKISHEGNTPKLVVKIPNQGRSPAQRASAGSFDEPTIMNSRVASPVLSEKHDQFDHGLKEKSDFYRVNIGSDVNSESWQSNDFKDVLTGSDEGDGSPAAVTDEEHCRTGNDCKKTDEVSKIASLSSGNGNKARNLQDASYSSINALVEGVKYSEADDVGMNLLASVAAGEMLKSELSTPTGSPERKATAVEQLCTSNAAVKPSEENIVRDECHSNNSLDAEDKKHGSISGEMNDDNDFDCPASGGKAIGELDKPVNALSKDLQHVTETIQTGLERKGISIEKSVPASLRALPGLQEARDFNCSKQLREEVVRGVNAGETLGIKVSGVAGVEVEAIDKSFHTSVEVDVNGDHSAERSGADRLTTQNSPTVHRQSDSAKGTDDDVLLSRGVDKVPEDFNEREHGKNSDIAAGNHANEAKMLRTERGHVVLAMPAKSGLCSSATDFSAERVEENSDIKEVHDQDAGQRLHKASSSYLSQEMDKQLDSKGSKPNAIEAEEAEECTSTTADASSMSAAAVSDADAKVEFDLNEGFGADDGKRGELNSIATSGCAPSVRFISPVPFSASSLSYGIPASITVAAAAKGPFMLPENLLRSKAELGWKGSAATSAFRPAEPRKVMETSLVTLTTPNPDTAAGKQSRLPLDIDLNVADERILDDISSPSCARYMNIASLEANGYNPVCSKMASPVRCSGGLGLDLNLMDEASDIGNCSASSSYKIDVPHMQVKSSLGGRSNREASAHRDFDLNNGPSVEEITIGPSLLSQHARSSVLTQPSVSGLRMSTAELGNFSSWLPSSGNTYSAVTISSIMPDRGDQPFSIVAPNGSQRLLSPATSGNPFGTDIYRGPVLSSSRAMPYPSAPFEYPVFPFNSSFPLPSSSFSAGSTTFVYPTSGSRPCFPVVNSQLMGPASTVSSHYPRPYGVGLPEGSSSTSVETSRKWTRQGLDLNAGPGGLDIEGRDEISPLASRQLSVASLQVLADEHARIHLAGSVLKRKEPDGGWDGHTKNSSWQ | 1618 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa2g02059 | 1618 | MobiDBLite | consensus disorder prediction | 702 | 724 | - | - | |
Vifa2g02059 | 1618 | ProSiteProfiles | BAH domain profile. | 33 | 148 | IPR001025 | GO:0003682 | |
Vifa2g02059 | 1618 | MobiDBLite | consensus disorder prediction | 1079 | 1093 | - | - | |
Vifa2g02059 | 1618 | Gene3D | - | 21 | 257 | IPR043151 | - | |
Vifa2g02059 | 1618 | PANTHER | BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED | 10 | 1618 | - | - | |
Vifa2g02059 | 1618 | Gene3D | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 264 | 400 | IPR035441 | - | |
Vifa2g02059 | 1618 | ProSiteProfiles | TFIIS N-terminal domain profile. | 320 | 399 | IPR017923 | - | |
Vifa2g02059 | 1618 | MobiDBLite | consensus disorder prediction | 11 | 26 | - | - | |
Vifa2g02059 | 1618 | MobiDBLite | consensus disorder prediction | 509 | 539 | - | - | |
Vifa2g02059 | 1618 | MobiDBLite | consensus disorder prediction | 987 | 1019 | - | - | |
Vifa2g02059 | 1618 | MobiDBLite | consensus disorder prediction | 429 | 488 | - | - | |
Vifa2g02059 | 1618 | MobiDBLite | consensus disorder prediction | 546 | 582 | - | - | |
Vifa2g02059 | 1618 | Pfam | BAH domain | 35 | 144 | IPR001025 | GO:0003682 | |
Vifa2g02059 | 1618 | SMART | TFS2_5 | 319 | 398 | IPR003617 | GO:0005634 | |
Vifa2g02059 | 1618 | MobiDBLite | consensus disorder prediction | 400 | 607 | - | - | |
Vifa2g02059 | 1618 | Pfam | TFIIS helical bundle-like domain | 347 | 396 | IPR017923 | - | |
Vifa2g02059 | 1618 | CDD | TFIIS_I | 334 | 397 | - | - | |
Vifa2g02059 | 1618 | MobiDBLite | consensus disorder prediction | 1060 | 1121 | - | - | |
Vifa2g02059 | 1618 | MobiDBLite | consensus disorder prediction | 971 | 986 | - | - | |
Vifa2g02059 | 1618 | MobiDBLite | consensus disorder prediction | 961 | 1024 | - | - | |
Vifa2g02059 | 1618 | SUPERFAMILY | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 301 | 411 | IPR035441 | - | |
Vifa2g02059 | 1618 | MobiDBLite | consensus disorder prediction | 175 | 239 | - | - | |
Vifa2g02059 | 1618 | MobiDBLite | consensus disorder prediction | 177 | 208 | - | - | |
Vifa2g02059 | 1618 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Vifa2g02059 | 1618 | SMART | BAH_4 | 33 | 148 | IPR001025 | GO:0003682 | |
Vifa2g02059 | 1618 | MobiDBLite | consensus disorder prediction | 1060 | 1078 | - | - | |
Vifa2g02059 | 1618 | MobiDBLite | consensus disorder prediction | 583 | 598 | - | - | |
Vifa2g02059 | 1618 | MobiDBLite | consensus disorder prediction | 1094 | 1108 | - | - | |
Vifa2g02059 | 1618 | MobiDBLite | consensus disorder prediction | 623 | 648 | - | - | |
Vifa2g02059 | 1618 | MobiDBLite | consensus disorder prediction | 1338 | 1360 | - | - | |
Vifa2g02059 | 1618 | MobiDBLite | consensus disorder prediction | 209 | 239 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa2g02059 | Vifa-Chr2 | 534731074 | 534737993 | Dispersed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | IWS1 | Vifa2g02059 | BAH | 2.1e-09 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa2g02059 | - | - | ccaj:109810746 | 2156.72 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vifa2g02059 | 2 | 534731074 | 534737993 | Vifa2g02059 | 2 | 534731074 | 534737993 | ECH |