Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02045 ATGCGAGATATGGGAAGAGAAATCATTCGTGAGGAATCACCAAGGAGGCCTGAGGAACGTAGTAGGTTGTGGTTTCACAAGGATGTGGTTGACGGAAAAGAAGGTGTTTTGGGACTGGCTTTAAAGCTGCCTAGAGCTAATGCAAAATGTTTTAGTACTAAAGCATTTGAGAAGATGGAGAGACTCAGACTCCTTCAACTTGATGAGGTAACACTTGATGGAGATTTTGAATATGTTTCTAGAGATCTGAGATGGCTGTCATGGAATGGATTAAGTCAAATTCTTATAAACTTCTATCGAGAAAATTTAGTTTCCATTGAGTTAAAGAATAGCAATCTTGAACTTCTAGGGAATAAGACTCTGTGGATGGTGAAGCTGAAAATTCTAAATCTTAGTCATTCTCACTTTCTCACACAAAGCCCTGACTTTTCAAACATGCCTAATCTTGAAAATCTAGTACTCAAAGATTGTCCATTGTTATATGCGGTTTCTCCTACCATTGGAGATCTCAAGAAAATTCTTCTGATAAATTTGGAAGACTGTCTAAATCAAACAACATTAATTGGATCAAAGTGCAGTGTCCTCAATAGCAAAACGGTATAG 603 0.3748 MRDMGREIIREESPRRPEERSRLWFHKDVVDGKEGVLGLALKLPRANAKCFSTKAFEKMERLRLLQLDEVTLDGDFEYVSRDLRWLSWNGLSQILINFYRENLVSIELKNSNLELLGNKTLWMVKLKILNLSHSHFLTQSPDFSNMPNLENLVLKDCPLLYAVSPTIGDLKKILLINLEDCLNQTTLIGSKCSVLNSKTV 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02045 200 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 187 IPR044974 GO:0006952
Vifa2g02045 200 SUPERFAMILY L domain-like 41 188 - -
Vifa2g02045 200 Gene3D Ribonuclease Inhibitor 37 199 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02045 Vifa-Chr2 532186071 532187495 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02045 1 181 WRKY Transcription Factor Family AT4G12020 34.300 1.01e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02045 - - psat:127121188 273.478