Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02041 ATGGATCCTAATCATTTTCATTATCAACAAGCTATGTTCAATTACATGTCAAATTATCAAAATCCTAATCCTCAAAATTCTCAATTTCCATCTGTGCCAACAAACCCCGCCATATATTTTCCGGAAACACTGATTGGGTTTATGTCCGGATGTCAAGTTCCACCAGTTTCTACTCAAGTTGGTACTGAAAAAGAAGAAAGGGTTGTTGTTAAAAAAAAATCTCGAGAGCAATTTACAAGGGATGAAGATATACTGCTTATCCAATCATGGCTCAATGTTTCAAAGGATCCAATTGTGGGAGTTGATCAAAAAGCTGAGAGTTTTTGGTTAAGAATCGCTGCCAATTATAACCAGTATCGTGGGCAATCGCGGGAAAAGTTAGGCGGGAAATTAAAATGTCGATGGCATCGAATAAATGGCTTGGTTCAAAAATTTGTTGGGTGTTACAAACAAGTTGTTAATGGAAAAAAAAGTGGGACATCGGAGAATGATATCATGGTTGCTGCACATGCTTTTTTTGCTCAGGATGAAGGTACAACATTCAATCTTGAGTATGTATGGCGATTGTTAAAAGATGAACCTAAATGGATGGGAGAATCAATTGGAAATTCTTCAAAAATTACAAAGAGCTCTGCTAGTGGGGCATCATCGGATAACCCAAATACACCTTCAAGTTATGAGTTTAACTCATCATCACCAATGGAGCGTCCAATGGGACAAAAAGCAACAAAAAGGAAGGGTAAGGCAAAGGAAATTCCAAATGCAATGCAAGATGCAAGGATTAAAAGAGCAGCAGCAGTGGAAAGACTAGCTCAATGTAAGGAGGACGAGCTAGAACTAAAGGCAATGAATATCATCATGAAAGACACTTCTACTATGAATGATAATCAACGAGATATTCATGAAAAATATTATGATTTTGACCAAGAATTTTGGGAGTTGATTGAAGAAGAATTTATCGACGATAGTGATGAAGAACAATTGCTTGAAAATGAACGTCAATCTGGAAGTTCATCTATGCCATAG 1026 0.3704 MDPNHFHYQQAMFNYMSNYQNPNPQNSQFPSVPTNPAIYFPETLIGFMSGCQVPPVSTQVGTEKEERVVVKKKSREQFTRDEDILLIQSWLNVSKDPIVGVDQKAESFWLRIAANYNQYRGQSREKLGGKLKCRWHRINGLVQKFVGCYKQVVNGKKSGTSENDIMVAAHAFFAQDEGTTFNLEYVWRLLKDEPKWMGESIGNSSKITKSSASGASSDNPNTPSSYEFNSSSPMERPMGQKATKRKGKAKEIPNAMQDARIKRAAAVERLAQCKEDELELKAMNIIMKDTSTMNDNQRDIHEKYYDFDQEFWELIEEEFIDDSDEEQLLENERQSGSSSMP 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02041 341 Coils Coil 256 276 - -
Vifa2g02041 341 PANTHER - 60 306 - -
Vifa2g02041 341 MobiDBLite consensus disorder prediction 201 256 - -
Vifa2g02041 341 MobiDBLite consensus disorder prediction 239 256 - -
Vifa2g02041 341 Pfam No apical meristem-associated C-terminal domain 180 299 IPR029466 -
Vifa2g02041 341 MobiDBLite consensus disorder prediction 201 237 - -
Vifa2g02041 341 MobiDBLite consensus disorder prediction 322 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02041 Vifa-Chr2 531635490 531637017 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02041 71 277 Glutathione S-transferase Gene Family AT5G41240 31.963 2.47e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02041 - - psat:127115199 416.387