Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02024 ATGGAAGAAACATTTGTTCCTTTTCGCGGAATTAAGAATGATTTCAAAGCAAGAATTATGTGCTACAAACAAGATTGGACTAGTGGATTCCGCGCAGGTGCAAGGATCCTTGCACCAACTACATACATATTTTTTGCTTCTGCAATTCCTGTTATTTCTTTTGGGGAGCAACTCGAGAGAACTACTGATGGAACTCTCACTGCTGTGCAGACTCTTGCATCAACTGCTCTATGTGGTATTGTCCACTCGGTTATTGGAGGGCAACCTCTCCTCATACTAGGTGTAGCCGAGCCAACCGTTCTGATGTATACATTCATGTACAATTTCGCAAAGGATCGTGAGGATTTAGGACACAAATTGTTCTTGCCTTGGACTGGATGGGTGTGCGTTTGGACTGCACTGTTGCTGTTCTTGCTGGCTATTCTTGGTGCATGCTCCATAATCAACCGGTTCACGCGCCTTACCGGTGAACTATTTGGTCTGTTAATTGCAATGCTCTTTATGCAGCAGGCTATAAAGGGACTTGTGGAAGAGTTTGGTGTACCAAAGACACAGACAGAAGGTACCAATCAAATTGCACTTCAATCCTCTTGGCTGTTTGGCAATGGAATGTTTGCTTTAGTTTTGTCGTTCGGCCTTCTTTTTACCGGTCTGGGAAGCCGCAAGGCTAGATCCTGGCGATACGGGACAGGTTGGCTACGAGGACTTATAGCTGATTACGGAGTCCCCTTAATGATTCTCGTATGGACTGCTGTATCTTACATACCTGTCAACAAAGTCCCAAGGGGAATCCCGAGGCGGCTTTTCAGTCCAAATCCATGGTCTCCTGGTGCATACTCAAATTGGACTGTTGTAAAGGAAATGTTGAATGTACCTCTATTGTACATCATTGGAGCATTTATACCAGCAACTATGATTGCCGTGCTTTACTACTTTGATCACAGTGTTGCATCACAACTTGCGCAGCAAAAAGAGTTCAATCTAAGGAAACCTTCATCTTATCATTATGACTTACTACTCCTTGGATTTTTGACCTTATTCTGCGGGCTTATAGGAATCCCTCCTTCCAACGGTGTGATTCCGCAATCTCCAATGCATACCAAGAGCTTAGCTACTCTAAAACATCAGATTTTACGGCATAAGCTCGTCTCTACTGCACGAACGAGCATGGAGAAAAACATGAACCTGAGTCAGTTTTACGAAAGTATGAGAGAAGCATATGACGTAATGCAGACACCATTGGTTTCCCAAATGCCACCCACGTTGGGGCTTAAAGAGTTGAAGGAGTCTACCGTTGCATTGGCTTCAAGTCATGGATACATTGATGCTCCTGTTGATGAAATCGTCTTTGATGTGAATAAGGATGTTGATGACCTTATGCCAGTCGAAGTTAAAGAGCAGCGCCTCAGCAATCTATTGCAGGCATCAATGGTTGCGGCTTGTGTTGCCGCTATGCCTCTTTTGAAGAAGATACCAACTTCAGTGCTTTGGGGTTACTTTGCCTTCATGGCTATTGAAAGCTTGCCAGGAAATCAATTTTGGGAGAGAATATTGTACCTTTTCACTGCTCCAAGTCGAAGATACAAACTGCTGGAGGAACACCATGCAACTTTTGTTGAGACTGTGCCTTTGAAAGCAATTGCTCTGTTTACTCTGTTCCAGACAGCTTACTTGCTTCTCTGCTTCGGCATAACCTGGATACCAATCGCTGGGGTCCTCTTCCCATTGTTAATCATGCTTCTTGTCCCGGTTCGGCAATATTTTCTTCCCCATTTTTTCAAAGGAGCCCATCTTCAAGAGTTGGACGCCGCATCATACGAGGAAGCACCTGCCATTACTTTCAACATGTCCTTTGATGATCTAAGTAACCACGGAACAACGGCCAATGTCAGTGGTGGAGAAATTCTTGATGAGATTATCACGAGGAGTCGCGGAGAGATACGTCGCACTCAAAGCTCTAAAGCATCTAGTTCATCTGCAACACCAATAGGAGGAGATATAAGACCTGCTAATAGCCCACAAATACCGCGAATGATTCCCAGCCCTCGAGTAACCGCATTGAGAGGGGAAAGCAGCAGCGTAGGATCAAACGGAAAGGAGTTAAAGTTAAAGCAAATTCCTTGA 2124 0.4449 MEETFVPFRGIKNDFKARIMCYKQDWTSGFRAGARILAPTTYIFFASAIPVISFGEQLERTTDGTLTAVQTLASTALCGIVHSVIGGQPLLILGVAEPTVLMYTFMYNFAKDREDLGHKLFLPWTGWVCVWTALLLFLLAILGACSIINRFTRLTGELFGLLIAMLFMQQAIKGLVEEFGVPKTQTEGTNQIALQSSWLFGNGMFALVLSFGLLFTGLGSRKARSWRYGTGWLRGLIADYGVPLMILVWTAVSYIPVNKVPRGIPRRLFSPNPWSPGAYSNWTVVKEMLNVPLLYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLFCGLIGIPPSNGVIPQSPMHTKSLATLKHQILRHKLVSTARTSMEKNMNLSQFYESMREAYDVMQTPLVSQMPPTLGLKELKESTVALASSHGYIDAPVDEIVFDVNKDVDDLMPVEVKEQRLSNLLQASMVAACVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKLLEEHHATFVETVPLKAIALFTLFQTAYLLLCFGITWIPIAGVLFPLLIMLLVPVRQYFLPHFFKGAHLQELDAASYEEAPAITFNMSFDDLSNHGTTANVSGGEILDEIITRSRGEIRRTQSSKASSSSATPIGGDIRPANSPQIPRMIPSPRVTALRGESSSVGSNGKELKLKQIP 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02024 707 MobiDBLite consensus disorder prediction 646 707 - -
Vifa2g02024 707 Pfam HCO3- transporter family 204 375 IPR011531 GO:0006820|GO:0016020
Vifa2g02024 707 Pfam HCO3- transporter family 7 182 IPR011531 GO:0006820|GO:0016020
Vifa2g02024 707 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016020
Vifa2g02024 707 MobiDBLite consensus disorder prediction 650 665 - -
Vifa2g02024 707 FunFam probable boron transporter 2 18 60 - -
Vifa2g02024 707 Gene3D Helical hairpin bin 18 60 - -
Vifa2g02024 707 PANTHER ANION EXCHANGE PROTEIN 2 610 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02024 Vifa-Chr2 526763637 526766872 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02024 1 692 Antiporters AT3G62270 73.988 0.0 1038
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02024 K24194 - gmx:100793554 1225.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02024 2 526763637 526766872 Vifa2g02024 2 526763637 526766872 ECH
Vifa2g02024 2 526763637 526766872 Vifa2g02024 2 526763637 526766872 PCT