Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02022 ATGCAGTCCGCCGCTTTCACTCTCTCCCCTTCTCTCCCTCTCCCAAATCTCAACCGCCTAACCGCCAACCGCTTAACTCGCTCCGCTAACCTCCGTCTCTCCGCCAAATTAAACGACGCCGCAAATCCCAATGGCGTATCTTCTTCTTCTTCCTCCTCCTCCTTCACTCGTAAATCATGGTCTCTTTCTTCCTCTTCTTTCAAATTCAGACCTCTTCCTCTCATTTCCACTTCCGATCTTTCTCCTCCTAAAGCCTCTTCCGAAAGCGCCGCCGAATCTGCTGACTCCGGTTCTTTGCTCAAAACTCTTCAACTCGGATCCTTGTTCGGATTGTGGTACCTCTTCAACATCTACTTCAATATCTACAATAAACAGGTTTTGAAGGCGTGTCATTTCCCTGTAACTGTTACGGTAGTTCAATTTGCTGTTGGGACTGTTCTTGTATCAGTTATGTGGGCTCTTAATCTCTACAAGAGGCCTAAAATCAATGGCGCAATGCTTGCAGCTATATTTCCACTAGCTATTGTGCATACTTTGGGGAACCTTTTCACTAATATGAGTCTTGGAAAGGTGGCTGTGTCTTTTACTCACACTATTAAAGCTATGGAGCCTTTCTTTTCGGTTATCCTTTCTGCCATGTTTCTTGGAGAGAGGCCTACACCTTGGGTGATTGGTTCCCTTGTGCCTATTGTTGGTGGAGTTGCCCTGGCGTCTGTTACTGAGGCCTCATTCAATTGGGCCGGATTTTGGAGTGCAATGGCTTCCAATGTGACAAACCAATCACGTAATGTTCTTAGCAAAAAAGTCATGGTTAAACAAGAGGAATCCTTGGACAACATAACTCTCTTCTCTATAATAACAATAATGTCCTTCTTCTTGTTAGCACCTGCAGCTATCTTCATGGAGGGTGTCAAATTCACCCCAGCTTACCTGCAATCTGCTGGATTAAATGTTAGACAAGTGTACACCAGATCTCTTCTTGCTGCACTCTGTTTCCATGCATATCAACAAGTTTCTTACATGATATTGCAGAGGGTATCACCTGTTACCCATTCCGTCGGCAATTGTGTGAAGCGTGTTGTGGTTATTGTGAGTTCTGTGATCATCTTCAAAACACCTGTCTCTCCTGTGAATGCTTTAGGTACTGCTGTAGGTCTTGCTGGCGTTTTCCTCTACTCAAGGGTGAAGCGAATTAAGTCAAAGCCAAAGGCAGCTTAA 1218 0.4483 MQSAAFTLSPSLPLPNLNRLTANRLTRSANLRLSAKLNDAANPNGVSSSSSSSSFTRKSWSLSSSSFKFRPLPLISTSDLSPPKASSESAAESADSGSLLKTLQLGSLFGLWYLFNIYFNIYNKQVLKACHFPVTVTVVQFAVGTVLVSVMWALNLYKRPKINGAMLAAIFPLAIVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVILSAMFLGERPTPWVIGSLVPIVGGVALASVTEASFNWAGFWSAMASNVTNQSRNVLSKKVMVKQEESLDNITLFSIITIMSFFLLAPAAIFMEGVKFTPAYLQSAGLNVRQVYTRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIIFKTPVSPVNALGTAVGLAGVFLYSRVKRIKSKPKAA 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02022 405 Pfam Triose-phosphate Transporter family 103 393 IPR004853 -
Vifa2g02022 405 SUPERFAMILY Multidrug resistance efflux transporter EmrE 147 239 - -
Vifa2g02022 405 SUPERFAMILY Multidrug resistance efflux transporter EmrE 295 396 - -
Vifa2g02022 405 PANTHER SOLUTE CARRIER FAMILY 35 104 399 - -
Vifa2g02022 405 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 103 403 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02022 Vifa-Chr2 525498792 525501200 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02022 1 405 Antiporters AT5G33320 69.544 0.0 540
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02022 2 525498792 525501200 Vifa2g02022 2 525498792 525501200 ECH