Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02011 ATGGCAAACCCATTTAGATCACAAGCTAGATTCTGGGTTGATTTTGTTGACAAGAAGGTCTATGAAAATGGAAGGAACCTTGTTTGGACCAAAAATGGAGAAGAGAAAGAAGCTGCAAAGAAGGAATTCATAGAAGCCCTCAAACTGTTGGAGCAAGAGTTGGGAGACAAGACTTATTTTGGAGGAGAGAAGCTTGGTTATGTGGATGTAGCACTTATTCCATTCTACACTTGGTTTAAAGGCTATGAGACTTTTGGTAACATCAATATAGAGAAGGAGTGTCCCAAGTTTATTGGTTGGGCTAAGAGATGTATTGAAATAGAGAGTGTTTCTAAGTCTATTCCTGATCAGGATAAGGTCTACCAGTTCATTGTGGAGGTCAGGAAGAAGAGGGGCATCGAGTAG 405 0.4049 MANPFRSQARFWVDFVDKKVYENGRNLVWTKNGEEKEAAKKEFIEALKLLEQELGDKTYFGGEKLGYVDVALIPFYTWFKGYETFGNINIEKECPKFIGWAKRCIEIESVSKSIPDQDKVYQFIVEVRKKRGIE 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02011 134 Gene3D - 5 134 - -
Vifa2g02011 134 Pfam Glutathione S-transferase, C-terminal domain 35 103 - -
Vifa2g02011 134 Coils Coil 33 53 - -
Vifa2g02011 134 CDD GST_C_Tau 6 124 IPR045074 GO:0004364|GO:0006749
Vifa2g02011 134 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 122 IPR045073 -
Vifa2g02011 134 FunFam Glutathione S-transferase U20 3 134 - -
Vifa2g02011 134 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 2 133 IPR010987 -
Vifa2g02011 134 SUPERFAMILY GST C-terminal domain-like 6 130 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02011 Vifa-Chr2 522773905 522774476 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02011 2 134 Glutathione S-transferase Gene Family AT1G17180 63.433 2.07e-58 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02011 K00799 - gmx:547520 199.519