Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01957 ATGTTCCAATATCTACCATCATTTCTGAAGCTCGATCTAAACACCACCCTTTTCATGTTTCTTTCCTTCTTCATCAGCATACTGCTTGTCTTAAAGTTCACAAGAATAAACAAATTAAATCTACCTCCATCCCCACCTGGATTGCCAATAATTGGTAACTACCTTCAACTAGGAACACTACCTCATCGTTCTTTTCATTCCCTATCACAAACGTATGGCCCTCTAATGTTGATGCAGCTTGGCCAGCTTCGTGTGCTGGTGGTTTCCTCAGTAGACATGGCCAAAGAAGTCATGCATACACATGATATGATTTTTGCGAGCCGCCCGAACCTGACATCAACAAAAGCCTTACTCTATGGATGCAAGGACATTGCGTTTGCAACTTATGGTGATACATGGAGACAGAAAAAGAAACTGTGTGTGATTGAATTGTTGAGTCAGAAAAGGGTGCAATCAGTAGAGTTTATTAGACAGGAGGAAGCGATGGCGTTGGTTGATAAGATACGTAAAGCGTTGAGTTTGAGTGAAGGTTGTCTCACTGTGAACCTTAGTGAGATGTTGATAGCAACCGCAAACAACATAATCTGCAGGTGTATGTTTGGAAAAAAATATGACGACGATGGTTGCAGATTTGGAGAGCTTGGCAGGCAGATAATGGTTCAAATTTCAGATTTTAGTATGGGAGATTTGTTTCCTTCGTTGGGTTGGGTGGATGTTCTTACTGGCCAAATTAAAAAATTTAAGACTACTTTTGAAGAAATGGACGATTTCTTTGATCATATAATTGTAGAGCGTAGGATGGCCAGGAAAGGCCCCAACAAGAAAGATTTCCTCGACATTCTACTTCAACTTCAGGCTGATGGTCTTTCAGAGTTCGACCTCACAGAAAATGACTTAAAAGCAATCTTACTGGACATGTTTTTAGGAGGAAGTGACACAACTTCAACAACAGTTGAATGGGCTATGGCAGAACTTGTAAAAAATCCAGCCATAATGAAGAAAGCACAGGAGGAGGTAAGGAGAATTGTAGGGAATAAATCAAAAATAGAGTACAGTGATGTCGATCAAATGGCCTACATGAAATGTGTAATCAAAGAAACTTTGAGGCTGCACCCAGCTGCTCCTCTTTTGACTCCTAGAGAAACAACATCTAGTGTTAAACTTGGAGGGTATGATATTCCTGATAAAACATTGGTATATATCAATGCATGGGCAATCCAGAGGGACCCTGAATTTTGGAAAAGGCCAGAAGAGTTTCTACCTGAGAGATTTGAAAATAACAAGGTTAATTTCAATGGTCAAGACTTCCAATTTATCCCGTTTGGTTCTGGGAGAAGAAATTGCCCGGGTATTGGGTTTGGGCTTGCTTCCACCGAGCATATGGTTGCTAATCTTTTGTATTGGTTTGACTGGAAGCTACCTACAAATGATGCATCTCTTCAAGAAATAGACATGACTGAGAAATTTGGGCTCACTGTCAACATGAAAGTTCCTCTGCGCCTCCAACCAATACCAAACAATAATTTCGTAGAATAA 1536 0.4036 MFQYLPSFLKLDLNTTLFMFLSFFISILLVLKFTRINKLNLPPSPPGLPIIGNYLQLGTLPHRSFHSLSQTYGPLMLMQLGQLRVLVVSSVDMAKEVMHTHDMIFASRPNLTSTKALLYGCKDIAFATYGDTWRQKKKLCVIELLSQKRVQSVEFIRQEEAMALVDKIRKALSLSEGCLTVNLSEMLIATANNIICRCMFGKKYDDDGCRFGELGRQIMVQISDFSMGDLFPSLGWVDVLTGQIKKFKTTFEEMDDFFDHIIVERRMARKGPNKKDFLDILLQLQADGLSEFDLTENDLKAILLDMFLGGSDTTSTTVEWAMAELVKNPAIMKKAQEEVRRIVGNKSKIEYSDVDQMAYMKCVIKETLRLHPAAPLLTPRETTSSVKLGGYDIPDKTLVYINAWAIQRDPEFWKRPEEFLPERFENNKVNFNGQDFQFIPFGSGRRNCPGIGFGLASTEHMVANLLYWFDWKLPTNDASLQEIDMTEKFGLTVNMKVPLRLQPIPNNNFVE 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01957 511 CDD CYP71-like 71 499 - -
Vifa2g01957 511 FunFam Cytochrome P450 83B1 29 502 - -
Vifa2g01957 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Vifa2g01957 511 Pfam Cytochrome P450 42 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01957 511 Gene3D Cytochrome P450 29 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01957 511 SUPERFAMILY Cytochrome P450 42 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01957 511 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01957 511 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01957 511 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01957 511 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01957 511 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01957 511 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01957 511 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01957 511 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01957 511 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01957 511 PANTHER CYTOCHROME P450 71B11-RELATED 29 504 - -
Vifa2g01957 511 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01957 511 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01957 511 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01957 Vifa-Chr2 505371996 505373779 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01957 17 504 Cytochrome P450 AT5G25140 43.408 6.07e-144 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01957 K20617 - cave:132175480 582.408