Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01954 ATGGCTCAGCTCCAATGGCTCTGGGAAAACTATAGACCATTCCTCCTCTGTGTATCCATTTTCATACCTCTATTGATGAGACTTCTCTTTGTAAACAACTCAAGAAAGAGAAAATCCAATCTACCTCCTGGTCCTCTTACCATACCCTTCATTGGAAATCTCCACCAGCTTGGCACCACGCCTCACATATCTTTACAAAGCCTTGCACACAAATATGGACCCATAATTTTCCTACAACTTGGACAAATCCCAACAGTGGTTGTTTCATCAGCTAGACTAGCAAAAGAAATATTGAAAACTCATGATCTTGCACTTGCAAGCCGGCCACAGTTGTTTTCAGCTAAGTACCTTTTTTACAACTGCACAGATATTGCTTTTGCTCCTTACAGTGCTTATTGGAGGCATGTGAGGAAAATTTGCATACTTGAGCTTCTAAGTGTCAAAAGAGTAAACTCATATAGTGCTGTTAGAGAAGAAGAAGTTTCTAGTTTAGTTCAAAGGGTTGCAGGGTGTTATCCAGGAACTACCAATTTGTCTAAGATGTTGGGACAGTATGCAAATAATGCTGTTTGCCGTGTGGCTTTTGGAAGGGACTTTTCAGAAGGAGGAGAGAGTGAAAAACATGGGTTCCAAAAGATGCTTGATGAGTCTCAGGAACTCCTTGGAGGATTCAGTGTTGGTGACTTTTTTCCTTCGCTCGAGTTCATACATAGCTTGACAGGTATGAAAGCGAGACTCATACATACTTCAAGAAAATTCGATCAGCTCTTCGATCAGATAGTGAATGAACACAGGGCTTGCAATAAACTAAAGGAGCATAAGGACCTTGTAGATATTTTACTTGAAGTGCAGAAGAATGGTTCGGGCGAGAGCGAAACGCCTCTCACCACTGATAATATCAAGGCAATAATCCTGGATATGTTTGCTGCTGGAACTGATACAACATTCATTACCCTTGATTGGGCAATGACAGAGCTGCTAATGAATGCTCCAGTTATGGAAAAAGCACAAAAGGAAGTGCGTAGCATTCTGCGAGAAAGAAGAGTTGTTGAAGAAACTGACCTGCATCAACTGCAGTACATGAGAGCTGTAATTAAAGAGACATTTCGCTTGCATCCTGCAGTACCGGTATTAGTCCCAAGAGAATCTATGGAAGATATTACAGTAGAAGGGTACGCAATTCCAGCTAAAACAAGAATTTTTGTCAATGCTTGGGCGATTGGTAGGAATTCGGAAAGTTGGGAAGATCCCGCTGCATTTAAACCAGAGAGATTTTTAGAGAGTAAAATTGATTATAAGGGGCGGGATTTTGAGCTAATACCATTTGGGGCAGGGAGAAGAGGTTGTCCAGCTATTACATTTGCCATTGCAGTTATTGAGCTTGGTCTTGCACAACTACTCTATAGCTTTGACTGGGAGCTTCCTCCTGGTATTACAGCAAAAGACTTGGATCTCGCTGAAGTTTTTGGCATCTCAATGCACAGGAGAGAAAATCTTCTTGTTGTTGCTAAGCCTTATTTTCTGTGA 1527 0.4145 MAQLQWLWENYRPFLLCVSIFIPLLMRLLFVNNSRKRKSNLPPGPLTIPFIGNLHQLGTTPHISLQSLAHKYGPIIFLQLGQIPTVVVSSARLAKEILKTHDLALASRPQLFSAKYLFYNCTDIAFAPYSAYWRHVRKICILELLSVKRVNSYSAVREEEVSSLVQRVAGCYPGTTNLSKMLGQYANNAVCRVAFGRDFSEGGESEKHGFQKMLDESQELLGGFSVGDFFPSLEFIHSLTGMKARLIHTSRKFDQLFDQIVNEHRACNKLKEHKDLVDILLEVQKNGSGESETPLTTDNIKAIILDMFAAGTDTTFITLDWAMTELLMNAPVMEKAQKEVRSILRERRVVEETDLHQLQYMRAVIKETFRLHPAVPVLVPRESMEDITVEGYAIPAKTRIFVNAWAIGRNSESWEDPAAFKPERFLESKIDYKGRDFELIPFGAGRRGCPAITFAIAVIELGLAQLLYSFDWELPPGITAKDLDLAEVFGISMHRRENLLVVAKPYFL 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01954 508 CDD CYP71-like 71 499 - -
Vifa2g01954 508 Gene3D Cytochrome P450 28 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01954 508 PANTHER CYTOCHROME P450 71B11-RELATED 26 504 - -
Vifa2g01954 508 Pfam Cytochrome P450 42 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01954 508 Coils Coil 333 353 - -
Vifa2g01954 508 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01954 508 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01954 508 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01954 508 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01954 508 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01954 508 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01954 508 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01954 508 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01954 508 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01954 508 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01954 508 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01954 508 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01954 508 FunFam Cytochrome P450 99A2 31 504 - -
Vifa2g01954 508 SUPERFAMILY Cytochrome P450 42 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01954 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01954 Vifa-Chr2 504689359 504690965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01954 14 502 Cytochrome P450 AT3G26310 43.548 3.33e-148 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01954 - - lang:109326078 789.645