Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01953 ATGAAAGCACTTTCCCTTTCCCTTCCCACAATCACTGCTACCAATTCCAATCTCAACTACGGTTCTTTCAGTGCTGCTTCTAGTTATGCCTCACTCTCTTCCTTACAACACCGTCCTTCTTCATCGACCACACTCTTCAGTATGAAGAAGAGTGTTGTTCGCGTGCAAGCTGAGAATGAAGATTTTGAATTGAAGCAAGTGAGGGATATGGCTGCTGCCAAAAAGAGATGGGAAGCTCTGCTCAGGGAAGAAAAAATTAAGGTTCTAACTCCAAAGGAAGCTGGTTATGCAGTTCAGCTTTCAAACAAGCCCCTTCTTGATGTCCGCCCCTCAAATGAACACAACAAGGCATGGGTGAAAGGTTCGACCTGGATTCCGATATTCGATGTTGATAATGGACTAGATATTGGAACTATTCCCAGAAAAGTTACAAATTTTGCTATGGGAGGTTGGTGGAGTGGCATGCCTACATTGTCTTTTGACAACTCGTTCTTACCCAAAGTAATGGAGAAGTTCCCCAAAGATGCGGAATTAATCGTTGCATGCCAGAAGGGACTGAGATCACTAGCTGCATGTGAACAACTGTACAATGCTGGCTACACAAACCTGTTCTGGGTTCAAGGAGGCTTCGAGGCTGCTGAAGAAGAGGATCTTGTAGTGGAGGGTTCAGTGCCACTCAAGTTTGCTGGAATCGGTGGTGTCTCGGAGTTCCTTGGTTGGACAGATCAACAGAGAGCCGCTGCAGCCAAGGAAGGCTGGGGATACAGATTAGTGTTTTCTGCACGCCTGATTGGATTATTTCTTGTTGCCGATGCATTATTTATCGGTGCTCAGCAAGCTGGACGCTATCTTCAGGAAATCAGAACCCATTGA 873 0.4582 MKALSLSLPTITATNSNLNYGSFSAASSYASLSSLQHRPSSSTTLFSMKKSVVRVQAENEDFELKQVRDMAAAKKRWEALLREEKIKVLTPKEAGYAVQLSNKPLLDVRPSNEHNKAWVKGSTWIPIFDVDNGLDIGTIPRKVTNFAMGGWWSGMPTLSFDNSFLPKVMEKFPKDAELIVACQKGLRSLAACEQLYNAGYTNLFWVQGGFEAAEEEDLVVEGSVPLKFAGIGGVSEFLGWTDQQRAAAAKEGWGYRLVFSARLIGLFLVADALFIGAQQAGRYLQEIRTH 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01953 290 CDD RHOD 105 212 - -
Vifa2g01953 290 Pfam Rhodanese-like domain 95 212 IPR001763 -
Vifa2g01953 290 SMART rhod_4 89 219 IPR001763 -
Vifa2g01953 290 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 11, CHLOROPLASTIC 16 288 IPR044664 -
Vifa2g01953 290 Gene3D - 86 255 IPR036873 -
Vifa2g01953 290 ProSiteProfiles Rhodanese domain profile. 99 222 IPR001763 -
Vifa2g01953 290 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 83 221 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01953 Vifa-Chr2 504685625 504688478 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01953 5 290 Sulfurtransferasese or Rhodanese AT4G24750 67.687 3.29e-143 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01953 - - tpra:123897303 506.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01953 2 504685625 504688478 Vifa2g01953 2 504685625 504688478 ECH