Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01807 ATGGGAGAAATTGTTGCAATGACTGGATATGATGAAACTCCTTTGCAGGGCTATTTTGCCGCAAGCTGCAAGAAGGTTCCCAATGGACATGGTTTACCTTTAGCTTTGACATTGAACCTTTCTTTTGCCATGAAAAAGATGATGAACGATAAGACATTTATTTATCATTTGCCTGCTTGTGAAACGATGGGATCTGCCACTATTATCTATAGTGACAAGATTGTTCTACTTGAATCAATATTCAACAACATTGGTGGAGAAGTTGTCAAAAATGAAAATGTGGAAATTGAAGAAAATGCGAAGAGTTATGTGGATGAGAATTCCAATTTTGATGAGGATATAATTATTGGTGTTATCGATTCTGGTGTGTGTCCTGAGAGTCAAGATACATTGCGTGTTATGATTGTCCAGTTTAAGCAATGA 423 0.3664 MGEIVAMTGYDETPLQGYFAASCKKVPNGHGLPLALTLNLSFAMKKMMNDKTFIYHLPACETMGSATIIYSDKIVLLESIFNNIGGEVVKNENVEIEENAKSYVDENSNFDEDIIIGVIDSGVCPESQDTLRVMIVQFKQ 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01807 140 SUPERFAMILY Calcium ATPase, transmembrane domain M 31 69 IPR023298 -
Vifa2g01807 140 Gene3D - 25 74 - -
Vifa2g01807 140 PANTHER CATION TRANSPORTING ATPASE 30 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01807 Vifa-Chr2 468155708 468156300 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01807 30 97 Primary Pumps ATPases AT4G37640 42.991 1.77e-18 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01807 K01537 - egt:105949345 76.2553