Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01806 ATGGCACAAAAGAATGCAATTGTTCGACGGCTCCCAAGTGTTGAAACTTTGGGATGTACCACTGTGATTTGTTTAGATAAAACTGAAACACTGACTACGAATCCAATGTTTGTGATGGAATTCTTCGCATTGGAAGGGAAAGCCACTGCTTCTAGACCATGGAAAATATGTGTTGTTTGTAATGATGCTAGTGTTTATTTTGACGGCCGCTTATTTCGAGCTATAGGCTTGCCAACTGAAGTTGCTTTCAAAGTTTTGGTTGAAAATATGGGGTTTCCGAATATCAATTTAAGGAACAAAACTCGCGACACACAAGGTGCAGTAAACAACGCGATGAATTATAATACCGTGAAGCTAGGATATAGTGAGTGGAAGAATAGAAGATCCAAAAGGGTAGCTATGTTGGAGTTTAACCGTGTTAGAAATTCGATGAGTGTTATTGTTCGTGAACCAGATGGTCAACATCAGTTTCTTGTCAAGGATGTTGTTGAGAGTTTATTGAAGCAAAGCTCGTTTATGCAACTTGCGAAGGGATATCTTGTTCCAATAGATGATCAATGTAAGGAACTACTTTTTCAAAGACTCCATGAGATGAGTTCGAAGGGGTTGCGTTGCTTGGGTTTGGCATGTAAAGATGAGTTGGGAGAGTTTTCAGATTATTCTGCAGACACTCATTGTAATACGGTGGGAGAATTGACTTGGTATTTTGCGTTTGATCATAATTATTGTGGATAA 735 0.3905 MAQKNAIVRRLPSVETLGCTTVICLDKTETLTTNPMFVMEFFALEGKATASRPWKICVVCNDASVYFDGRLFRAIGLPTEVAFKVLVENMGFPNINLRNKTRDTQGAVNNAMNYNTVKLGYSEWKNRRSKRVAMLEFNRVRNSMSVIVREPDGQHQFLVKDVVESLLKQSSFMQLAKGYLVPIDDQCKELLFQRLHEMSSKGLRCLGLACKDELGEFSDYSADTHCNTVGELTWYFAFDHNYCG 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01806 244 Gene3D - 34 46 IPR023299 GO:0000166
Vifa2g01806 244 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 31 225 IPR023299 GO:0000166
Vifa2g01806 244 Pfam Cation transport ATPase (P-type) 59 172 - -
Vifa2g01806 244 Gene3D - 21 33 IPR023214 -
Vifa2g01806 244 PANTHER CALCIUM-TRANSPORTING ATPASE 1 217 - -
Vifa2g01806 244 Gene3D - 1 20 - -
Vifa2g01806 244 Gene3D - 75 234 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01806 Vifa-Chr2 468144668 468145490 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01806 1 225 Primary Pumps ATPases(2) AT4G00900 53.333 6.24e-81 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01806 K01537 - gmx:100792952 300.827