Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01789 ATGAGCAAATCCAAAGCTCAAAGAATGCCTACCATTGCTAACAATGTAAGCCAAAAGGAAAACCAAAAGCCTCAGAAAACTGAGAAACAACCCTCTTGGGCAGTTGTTAGAGGCTTTTTGGCTTGTAGGAATATTGAAGTCCAACAACAGCAACAGCAGAAAGAAGCAAAACACCAACCACAACCACAACCTCAAGATGTAGCAGAAACAAAACAACCTAAGAAGAAACAAGAACAGAGAAAGCTGAAAGAGGAAAGAGTCCCTGAAGACAACAACAAGAAATGCAAGAAGATGAAATGTTCAGGTTCTCTCTGCAACAATACTGGAATGATGGAAAAACCAGAAGCAACAACAACAGCAGCAACGTCAACAACAACAAAAACAAGAACAACTACAGATATTCACAAGAAAAAGGCATCACTTGGTGGCTCCAAAACCAACCTGGCTTCAAGCTCTAGCAGATCCATGAAAGCTCCTCTTAATGAACTTAACGGAAGAACCGCTTCGGCTTTGTCGTCTTCTTCGCAATCAGCAGCATCTTCTAACTCATCTGGCGCTGGTTCTTTTAGGGGAATGCCTTTTCGGAGACTCTCCGGTTGCTACGAGTGTCGAATGGTTGTTGACCCCGTTCTTGGTTTCACCAGAGACTCTTCTCTTAGAAGCTCCATTTGTTCTTGTCCTGATTGTGGTGAAGTCATGAAAACTGAAAGCCTTGAACATCACCAAGCCGTCAAACATGCAGTTTCTGAGTTGGGACCAGAAGATACAAGCAAGAACATAGTGGAAATCATATTTCATTCAAGCTGGCTAAAGAAGCAATCTCCGGTCTGCAAAATCGACCGCATCCTTAAAGTCCACAACACACAGAAAACCATAACAAAATTCGAAGAGTACCGAGACTCAATCAAAGCGAAAGCAACCAATCTCTCGAAAAAACACCCCCGCTGTATAGCAGACGGGAACGAGTTACTAAGGTTTCACTGCACAACCTTTGTTTGTTCTTTAGGCCTAAACGGCTCCTCGAATCTCTGCAATTCCACACCGCAATGCAACGTGTGCAGCATAATAAAACACGGGTTTAAGTTGAGTAGTGGAGGAGAAGGGATATTGACGACAGCGACGAGCGGCAAAGCACACGACAAAGCTAGTGGTGTTTTGGATGTTTCAGGTTATGAGGGTGGTGATGAGAAGAGAGCAATGTTGGTTTGTAGGGTGATAGCAGGGAGAGTGAAGAAGAACATGGAAGGTGGTAGTAATGGTATGGAAGAGTATGATTCGGTTAGTGCTGGTGATGTTGGTGCTTATTCAAATTTGGATGAGTTATATGTGTACAATCCTCGAGCTATTTTGCCTTGCTTTGTTGTAATCTATAGAGGCTTTTGA 1383 0.4317 MSKSKAQRMPTIANNVSQKENQKPQKTEKQPSWAVVRGFLACRNIEVQQQQQQKEAKHQPQPQPQDVAETKQPKKKQEQRKLKEERVPEDNNKKCKKMKCSGSLCNNTGMMEKPEATTTAATSTTTKTRTTTDIHKKKASLGGSKTNLASSSSRSMKAPLNELNGRTASALSSSSQSAASSNSSGAGSFRGMPFRRLSGCYECRMVVDPVLGFTRDSSLRSSICSCPDCGEVMKTESLEHHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQSPVCKIDRILKVHNTQKTITKFEEYRDSIKAKATNLSKKHPRCIADGNELLRFHCTTFVCSLGLNGSSNLCNSTPQCNVCSIIKHGFKLSSGGEGILTTATSGKAHDKASGVLDVSGYEGGDEKRAMLVCRVIAGRVKKNMEGGSNGMEEYDSVSAGDVGAYSNLDELYVYNPRAILPCFVVIYRGF 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01789 460 MobiDBLite consensus disorder prediction 1 21 - -
Vifa2g01789 460 SUPERFAMILY ADP-ribosylation 248 459 - -
Vifa2g01789 460 Gene3D - 247 458 - -
Vifa2g01789 460 MobiDBLite consensus disorder prediction 47 68 - -
Vifa2g01789 460 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 98 457 - -
Vifa2g01789 460 MobiDBLite consensus disorder prediction 143 188 - -
Vifa2g01789 460 MobiDBLite consensus disorder prediction 1 32 - -
Vifa2g01789 460 MobiDBLite consensus disorder prediction 47 188 - -
Vifa2g01789 460 MobiDBLite consensus disorder prediction 101 129 - -
Vifa2g01789 460 MobiDBLite consensus disorder prediction 69 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01789 Vifa-Chr2 463614636 463616111 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01789 189 458 C2H2 Transcription Factor Family AT1G75710 53.846 1.96e-99 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01789 - - psat:127084116 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01789 2 463614636 463616111 Vifa2g01789 2 463614636 463616111 ECH