Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01783 ATGGCTCCTTCTTCTCCGAGTAAGAGTTGCCCGCAACCTCTTTCAACCGCAGAGAACGATCTCCAGCCATTCTTTGTTCTACATAAAGCTTCACATCACGGGAAAGATAGAACATCAGCAGGACAAGGAAAATCTCGCAAGAGAAATAAGCTTTCGCCTATATTGTCACAGAGTGCAAATAAACCAGAAGGAAGTTCAACCGAAGAATGTGATCGCTATATGCGCCGGAAAATGCAGATTGAAGCTTTTGATATTGTTTGGACAAAAATTGAATCTACCATTAAGGATGTTTTGAGAGACCTCAATGCTAGTGTATTCAATAATATACAGCAATGGGTTATGGAGTGCTTTGATGCTATTAGATTGGTTGGAGAACCTAGCATTGCTGAAGCAACTCGGTCTTTTCCTGTTCTAAATAATACTACTCCTTTGAAGCTGTACAGTGCATTAGTTATTACCAGAAACATAGAGTTTGTTGATGATATAATGACATTTGAAGAGCTTGGCCTTTTTTTGAAATCCCATGGATGCCATGTGACTAAGCTTTCTTCAATGGAGTTTTCGTTAAAAAATGGGATTGCTGGTTGCTTGAAAGCGTTATTGCGAGAGTTTATAGGGAGTTCTTTCGACCCAGCTGATATACAAACCTTAGCGTCATGGTATAGAGAACAAGACAACTACAATAAACCACTAGTGCTGATGATTAATGATTTGGAAAGGTGTTGCGGATCAGTCTTAACTGATTTTATCCTTATGTTGAGTGAATGGGTTGTCAAGGTGCCAATCATCTTAATATTTGGAGTTGCAACAACAGTGGATGCCCCAAGAAACATTTTTCCATCACATGCTCTTGAATGTTTGTGCCCTTCTATGTTTATGCTTGTAACACCAGCTGAGAGAATGGATGCAATTGTTGAATCTGTTTTTATAAAACATTGCACCACATTTAATATTGGTCATAAAGTGGCGCAGTTATTGAGAAACTACTTCATCAACCAGGATGGGACAGTAACATCTTTTATAAGAGCTTTGAAGGTAGCATGCTTATTACACTTCTCTATGGAACCTTTGAGTCTCATACAAGGGAAAGTTATCGTTGAAGACCAGCTGAGAAATTCTGGATTATCACCTGAGACAATGTTGAAATACATGGAGGAGCTTCCATCACATGCAAGTTATAATTTCTCTAGGAATAAAATGGATGATCAGACTAACAAGAGCATGGCGGAGGGTTTGTCAGAATTGTTGACAGTGCAGAAACTATGGAGCACTGTGGTTCTTTGCCTATATGAGGCTGGAAAATATAGCGGAGTCCGGCTGCTGGATTTGTTTTGTGAAGCACTCAATCATGTTTTGTATCCATCAAGGGATTCTGTTTGTAAGAAGAGGGATGAAAAAGACCATGACTTGTCCTCAACAAATGATCCCTGTCAGCAATATTCCATCATGCAAAGTGGAGGTTATATTTGCCAGATAGTACGCAAAGTGAGGGATCTCCCTTCAGGAAAGCTAGATCAATTGATTGAGAGTTGGGAAAAACTTACAGTAGATATTTCAGAGATTTATGAGAAACTGAAAATCTTGCAATCTTCAATAAGATGTAAAGATGGAAAGAGTTCACTCAGGAATTCCAAGGACATTTCCAAGAGAGGTGTGTCCAAGGGTTCTATAAATAATGACAAGGACTCAAGAATGTCTAACTTGCAAGCTGTTGCATTTCTTGATGATTTAGTCAGAAATTACTTGAGGCCCATTGAAGGAATACCATTCCATGAAATTTTCTGCTTCAAGAATGTTGAGAAGCTTCAACTGGTTTTGATTGGAGATCCAAGGAGAACGATTCAAGTTGATCTGTTGGAGTTCCATAATATTTTACATTGTAGTTGCTGTAACAAGAGTGGCAAAGCCCTATTGCCATCCATGCATGATTCCTCAATCATGTATTCACTGGCTCAAGAGCACGGAGATCTTATCAATCTTCATGACTGGTTCCAGTCTTTTAGAACAATTGTTCAACATACAAATAAGCGGAAACAAAAACCGAAGCATACTCCCCAACCCAAGAAGAGAAAAGACACGACTGGATCTGAAGATCAAAATGAAGCGTCAATTCAAGCACGATTTTGCAGGGGAGTTATAGAGCTGCAGATCACTGGACTAGTAAGAATGCCTAGCAAAAGACGTCCAGATTTTGTACAGAGAATAGCATTTGGAATTTGA 2220 0.3914 MAPSSPSKSCPQPLSTAENDLQPFFVLHKASHHGKDRTSAGQGKSRKRNKLSPILSQSANKPEGSSTEECDRYMRRKMQIEAFDIVWTKIESTIKDVLRDLNASVFNNIQQWVMECFDAIRLVGEPSIAEATRSFPVLNNTTPLKLYSALVITRNIEFVDDIMTFEELGLFLKSHGCHVTKLSSMEFSLKNGIAGCLKALLREFIGSSFDPADIQTLASWYREQDNYNKPLVLMINDLERCCGSVLTDFILMLSEWVVKVPIILIFGVATTVDAPRNIFPSHALECLCPSMFMLVTPAERMDAIVESVFIKHCTTFNIGHKVAQLLRNYFINQDGTVTSFIRALKVACLLHFSMEPLSLIQGKVIVEDQLRNSGLSPETMLKYMEELPSHASYNFSRNKMDDQTNKSMAEGLSELLTVQKLWSTVVLCLYEAGKYSGVRLLDLFCEALNHVLYPSRDSVCKKRDEKDHDLSSTNDPCQQYSIMQSGGYICQIVRKVRDLPSGKLDQLIESWEKLTVDISEIYEKLKILQSSIRCKDGKSSLRNSKDISKRGVSKGSINNDKDSRMSNLQAVAFLDDLVRNYLRPIEGIPFHEIFCFKNVEKLQLVLIGDPRRTIQVDLLEFHNILHCSCCNKSGKALLPSMHDSSIMYSLAQEHGDLINLHDWFQSFRTIVQHTNKRKQKPKHTPQPKKRKDTTGSEDQNEASIQARFCRGVIELQITGLVRMPSKRRPDFVQRIAFGI 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01783 739 MobiDBLite consensus disorder prediction 674 701 - -
Vifa2g01783 739 MobiDBLite consensus disorder prediction 29 43 - -
Vifa2g01783 739 MobiDBLite consensus disorder prediction 45 64 - -
Vifa2g01783 739 MobiDBLite consensus disorder prediction 537 561 - -
Vifa2g01783 739 Pfam Origin recognition complex winged helix C-terminal 611 737 IPR040855 -
Vifa2g01783 739 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 16 738 IPR020795 GO:0003677|GO:0005664|GO:0006260
Vifa2g01783 739 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 70 359 IPR045667 -
Vifa2g01783 739 MobiDBLite consensus disorder prediction 28 69 - -
Vifa2g01783 739 CDD Orc3 81 737 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01783 Vifa-Chr2 461312475 461321997 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01783 1 671 Core DNA Replication Machinery Family AT5G16690 44.964 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01783 K02605 - gmx:100780646 1068.91