Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01771 ATGGATAAAATAGGTTTTGCTAGTTTTGGCAGTAAGGCAAAGCCTTATGTGTTAACAGTGGCTATTCAATTTGGGTTTGCAGGAGCATTCATATTCTCCATGGCCAGTTTCAATATGGGAATGAGTCGTTTTGTGTTCATTGTTTATCGTAATATCATTGCTGCAATTACCCTTGCTCCTTTTGCATGGTTTTTTGAAAGGAAAGTTAGGCCAAAGATGACTATCTCTGTCTTTTTGCAGATAATGGCGCTCGCATTTTTGGAGCCAGTGATTGATCAAGGATTCACTTTCTTGGGAATGCAATACACATCAGCTTCATTTACATCTGTTTTGATTAATACTGTGCCTTCTATGACCTTTTTCCTAGCCGTAATTTTCAGGATTGAACATGTAAATATTAAGCAGATACGAAGCATAGCAAAGGTGATTGGAACATTAGTAACATTTACAGGAACACTCTTTATATTATTGGGTTGTTTAGCTTGGTCATCTTTCTTCATATTACAGTCGATAACGTTGAAAAAGTATCCGGCTGAAATGTCACTGTCTACCTTAATTTGCTTAGTTGGTGCTTTCCAAAGTAGCGCGGTGGCGTTGGTGGCGGAGCATAACTCAGGTGCTGGAGTTTGGGCTCTTGGTTGGGACTTTAGGCTCTATGGCCCTCTCTACACGGGAATAGTTACCTCAGGATTAACATATTATGTGCAAGGGTTGGTAATGCAAATCAGAGGCCCAGTATTTTACACAGCATTTAATCCTCTTTGTATGATCATCACTTGTGCTTTAGGCTCTTTCCTTTTCGGAGAACAACTCCACTTGGGCAGTATCATTGGAGCAGTGATTATTGCAATGGGTCTTTATGCTGTGGTGTGGGGTAAAGCCAAAGACTATTTATCAGCCACTACTACAATTAAGCAAACTGAGACGCAACAACTTCCAATTACTTCATCTGATCATGTCTAA 963 0.3988 MDKIGFASFGSKAKPYVLTVAIQFGFAGAFIFSMASFNMGMSRFVFIVYRNIIAAITLAPFAWFFERKVRPKMTISVFLQIMALAFLEPVIDQGFTFLGMQYTSASFTSVLINTVPSMTFFLAVIFRIEHVNIKQIRSIAKVIGTLVTFTGTLFILLGCLAWSSFFILQSITLKKYPAEMSLSTLICLVGAFQSSAVALVAEHNSGAGVWALGWDFRLYGPLYTGIVTSGLTYYVQGLVMQIRGPVFYTAFNPLCMIITCALGSFLFGEQLHLGSIIGAVIIAMGLYAVVWGKAKDYLSATTTIKQTETQQLPITSSDHV 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01771 320 SUPERFAMILY Multidrug resistance efflux transporter EmrE 212 294 - -
Vifa2g01771 320 Pfam EamA-like transporter family 150 290 IPR000620 GO:0016020
Vifa2g01771 320 Pfam EamA-like transporter family 16 143 IPR000620 GO:0016020
Vifa2g01771 320 PANTHER WAT1-RELATED PROTEIN 14 297 IPR030184 GO:0016020|GO:0022857
Vifa2g01771 320 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01771 Vifa-Chr2 456855324 456858066 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01771 1 311 Nodulin-like Gene Family AT2G37460 43.228 2.08e-102 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01771 - - gmx:100812537 458.759