Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01768 ATGGGTGCATGGTTAAGAAATGCAAAACCATATCTACTACTCTTGGCTGTTCAATTTGGTTCCGCAGGAATGTTCATCTTCGCCATGGACGCTATCAAAAAAGGAATGAGCCATTATGTTTTCATTGTCTACCGTAATGCTATCGCCACCGTAACATTAGCTCCATTCGCGTTTTATCTTGAAAGGAAGATTAGACCAAAGATGAGTCTCCGTGTGTTTTCAGAGATTATGTTACTGGCTTTTTTCGAAATAATACTTGATCAATGTTTTGCTCTGTTGGGGATGAAATTAACGTCGGCTTCCTTCCTTTCCGCTGTGATGAACTCTGCGCCTTCCATAACTTTTCTGTTCGCCGTCATATTAAAATTGGAGCGAATGAAGATAAAGGAAGTGGCGTGTCAAGCCAAAATGATTGGTACTGCAATAACATTTGCAGGAACATTGTTGATGGCTTTGTACAAAGGTCCTGTAGTTAGTGTTGTGAAGTCATCAATCAGTCATGCTACCAGCCAGGCTGAGAATGTGAACGATTCCGGTAACGACCGGTGGATCATAGGAACATGTTTCCTCCTCATTGGTTGCGCTGGTTTTTCCGCCTTTTACATATTGCAGGCCATAACATTGAGAAAGTACTCAGCACCGATGTCGCTGGCAACGTGGGTTTGTTTTAGTGGCGCACTTCAAAGCTTTGTGGTGACAATTATCGTTGAGCGTCATAACTCTGATGCTTGGGCTCTTGGTTGGGATTCACGACTCTTCGCCCCAGCTTATGCGGGGATAGTTACATCAGGAGTGCAGTATTACATACAAGGGTTAGTTATGAAAGCTATGGGTCCAGTTATTGTAACTGCTTTTAATCCGTTGCGAATGATCATTGTAACGGCCTTGGCATGCATCATTCTTGATGAGAAGCTCTTTCTTGGAAGTATTATTGGAGCAGTAGTGGTGGTTCTTGGGCTTTATCTAGTTGTGTGGGGAAAATCAAAAGAACAGAAAGGCCGGAATAATGATATTCATATGACAGAGTCACCTATGAAGGAGAATCCATTACAAGACCTACATCAGTTACCTGTCACAGCTCCTAAAAATGATAGTAGTGATAGTAATAAATCTCAATTGGTCATGCATGGTGAAGAAACATGTTACAATTGTGGTCGAAATTGA 1164 0.4192 MGAWLRNAKPYLLLLAVQFGSAGMFIFAMDAIKKGMSHYVFIVYRNAIATVTLAPFAFYLERKIRPKMSLRVFSEIMLLAFFEIILDQCFALLGMKLTSASFLSAVMNSAPSITFLFAVILKLERMKIKEVACQAKMIGTAITFAGTLLMALYKGPVVSVVKSSISHATSQAENVNDSGNDRWIIGTCFLLIGCAGFSAFYILQAITLRKYSAPMSLATWVCFSGALQSFVVTIIVERHNSDAWALGWDSRLFAPAYAGIVTSGVQYYIQGLVMKAMGPVIVTAFNPLRMIIVTALACIILDEKLFLGSIIGAVVVVLGLYLVVWGKSKEQKGRNNDIHMTESPMKENPLQDLHQLPVTAPKNDSSDSNKSQLVMHGEETCYNCGRN 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01768 387 Pfam EamA-like transporter family 185 324 IPR000620 GO:0016020
Vifa2g01768 387 Pfam EamA-like transporter family 9 151 IPR000620 GO:0016020
Vifa2g01768 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
Vifa2g01768 387 PANTHER WAT1-RELATED PROTEIN 10 340 IPR030184 GO:0016020|GO:0022857
Vifa2g01768 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01768 Vifa-Chr2 455690198 455691732 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01768 5 379 Nodulin-like Gene Family AT2G37460 40.633 2.16e-102 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01768 - - psat:127084085 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01768 2 455690198 455691732 Vifa2g01768 2 455690198 455691732 ECH