Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01767 ATGGAGAATCAAAATGCTATTGATAAGGTTAACAATGGTTCATTACTTCGTAAGATGAAACCTTACCTTGCTATATTGTCTCTTCAATTTGGTTACTCAGGGATGTACATCATTACTATGGTTTCTTTCAAACATGGTATGAGTCATTGGATTCTCTCAGTGTATCGCCATGTTGTGGCTGCGATTATAATCATTCCTTTCGCGCTTGTTCTCGAAAGGAAAATAAGGCCAAAGATGACTCTTCCTATCTTCTTGAGGATAGTGGCACTTGGTTTCCTTGAGCCTGTACTGGATCAAAACTTGTACAACATGGGAATGAAGATGACTTCAACAACGTTTGCATCTGCAGTTGTTAATGTCCTTCCAGCTCTAACTTTTATAATGGCACTCACTTTCAGGTTAGAGTCGGTAAATTGGAGAAAATTCCATAGCGTAGCCAAAGTAATTGGAACGGTTATAACCGTTTCAGGAGCTATGGTTATGACTTTGTACAAAGGACCTGCCTTTCAGATCTTAAAAGGAGGAGGAATCCACCACAACAGCGATGCTGCTGCTGATGAACCCTTCAAACAAAATTGGGTGATGGGTCCATTAATGCTCATAGCAAGTTGTGCTAGTTGGGCTGGATTCTTTATTTTGCAATCATTCACTTTGAAGAAATACCCAGCAGAGCTATCACTCACAGCATGGATTTGTATAGTGGGAATAATTGAGGGTTCAATTGCATCACTTATATTTGAAAGGGACATGAGTGTGTGGGTCATAGGTTGGGACTCAAGGCTTCTTGCTTGTGTTTATACTGGTGTAATATGCTCTGCAATGGCATATTATGTACAAGGAGTTGTAACAAGAGAACGTGGACCAGTTTTTGTAACTTCTTTCAGTCCATTATGCATGATTATCACTGCTGCATTGGGTTCACTTGTCTTAGCAGAACAAGTTCATCTTGGAAGTATATTTGGAGCTATACTCATTGTTGCTGGACTTTACACTGTGGTGTGGGGAAAAAGCAAAGATCCTCGTGAAGGCACAAAAGAAATCCAAGACTTGCCAATTAAGGATGGTACAAAATCAGAGACAGACATTTTTGATGGAATTGAGGTTAATGTTGCAGATGAAAAGTTGAAAAAAGGAGCAGCAAAAAATGTTCTAACATAA 1158 0.3938 MENQNAIDKVNNGSLLRKMKPYLAILSLQFGYSGMYIITMVSFKHGMSHWILSVYRHVVAAIIIIPFALVLERKIRPKMTLPIFLRIVALGFLEPVLDQNLYNMGMKMTSTTFASAVVNVLPALTFIMALTFRLESVNWRKFHSVAKVIGTVITVSGAMVMTLYKGPAFQILKGGGIHHNSDAAADEPFKQNWVMGPLMLIASCASWAGFFILQSFTLKKYPAELSLTAWICIVGIIEGSIASLIFERDMSVWVIGWDSRLLACVYTGVICSAMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSLVLAEQVHLGSIFGAILIVAGLYTVVWGKSKDPREGTKEIQDLPIKDGTKSETDIFDGIEVNVADEKLKKGAAKNVLT 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01767 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 55 155 - -
Vifa2g01767 385 PANTHER WAT1-RELATED PROTEIN 21 340 IPR030184 GO:0016020|GO:0022857
Vifa2g01767 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 253 338 - -
Vifa2g01767 385 Pfam EamA-like transporter family 195 333 IPR000620 GO:0016020
Vifa2g01767 385 Pfam EamA-like transporter family 26 154 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01767 Vifa-Chr2 455564221 455567707 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01767 12 369 Nodulin-like Gene Family AT4G08300 63.144 1.31e-167 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01767 - - gmx:100783910 632.869