Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01749 ATGGCTTCTTACTACTTCCTCTTGTTTGTTCTTGTTGCTGCTTTTGCACTTTCTGAAGTAAATTGCAATGAGTTATGTACAGATTTCTATTGCGACAGTTGCCCGAAACTGTTGTTTATAGTGAATCAAGGAGTCATAAAAGCCATTCATAATGAAGCTCGCATAGGAGCTTCCTTACTTCGATTGCATTTCCACGACTGCTTTGTAAACGGCTGTGATGGATCAATATTATTGGATGATACAAACAGTTTCATAGGAGAAAAAACAGCAGCAGCCAACAATAATTCAGCTAGAGGATTCAACGTGATTGATGACATTAAAGCCAACGTCGAGAAAGCATGCCCAAGAACTGTTTCTTGTGCTGATATTCTTGCTCTGGCTGCTCGAGACTCCGTTGTTACTCTAGGAGGCCCTTCTTGGGAAGTAGGATTGGGAAGAAGGGATTCAATCACAGCTAGTAGGGCTGACGCCAATAAGTCTATTCCGGCACCCTTTCTCAATCTTGACAAACTCAAAGCAAGTTTTGCTAACCAAGGACTCTCAGAAAAGGACTTGGTAGCTCTTTCAGGTGCACATACAATTGGGCTAGCCAGATGTTCGCAGTTTCGAGCACATATCTACAATGATTCCAACATTGACCCTTCATTTGCCAAGTCACTACAGAGCAAGTGTCCCAGAACTGGAAATGACAATATTCACCAACCATTCGACTTTCAAACCCCGGCTCATTTTGATAACCTATACTACAAGCATCTACTTGCTAAAAAGGGTCTTGTCCATTCTGACCAGGAATTATTCAATGGGAATCCCACTACTGATAAACTGGTGCAGAAATATGCTAATGATAACGAAGAATTTTTCGAAGACTTTGCCGAGGGCATGGTCAAAATGAGTAATCTGAACCCCCTCACAGGAAGCAAAGGACAGATCAGAATCAATTGCAAAAAAAACAACTGA 957 0.4159 MASYYFLLFVLVAAFALSEVNCNELCTDFYCDSCPKLLFIVNQGVIKAIHNEARIGASLLRLHFHDCFVNGCDGSILLDDTNSFIGEKTAAANNNSARGFNVIDDIKANVEKACPRTVSCADILALAARDSVVTLGGPSWEVGLGRRDSITASRADANKSIPAPFLNLDKLKASFANQGLSEKDLVALSGAHTIGLARCSQFRAHIYNDSNIDPSFAKSLQSKCPRTGNDNIHQPFDFQTPAHFDNLYYKHLLAKKGLVHSDQELFNGNPTTDKLVQKYANDNEEFFEDFAEGMVKMSNLNPLTGSKGQIRINCKKNN 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01749 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Vifa2g01749 318 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Vifa2g01749 318 SUPERFAMILY Heme-dependent peroxidases 25 317 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa2g01749 318 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g01749 318 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g01749 318 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g01749 318 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g01749 318 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g01749 318 Pfam Peroxidase 43 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g01749 318 ProSiteProfiles Plant heme peroxidase family profile. 24 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g01749 318 Gene3D Peroxidase, domain 2 162 297 - -
Vifa2g01749 318 FunFam Peroxidase 28 169 - -
Vifa2g01749 318 CDD secretory_peroxidase 28 316 IPR033905 GO:0004601|GO:0042744
Vifa2g01749 318 Gene3D - 28 315 - -
Vifa2g01749 318 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g01749 318 PRINTS Plant peroxidase signature 235 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g01749 318 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g01749 318 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g01749 318 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g01749 318 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g01749 318 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g01749 318 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g01749 318 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g01749 318 PANTHER PEROXIDASE 72-RELATED 23 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g01749 318 FunFam Peroxidase 162 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01749 Vifa-Chr2 451376727 451378017 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01749 24 318 Peroxidase AT5G05340 59.060 4.80e-127 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01749 K00430 - gmx:100793973 445.277