Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01746 ATGGATTGTTGTGTGTGCACAACTATGCCATTAATATTAAGGCCTCCAAGGAATACGATATGTGGAACATGTTATGAAGGAGTTAGGAGCATAATCAACATGATGAACGGTCTTGAAAGTGATAAAACAAAAGCAATCACTAATCCAACCGATTCTCCGGTTTCGCGGCGAAATTCGAGTAAGACACTTGATGATTGCATAAGATTATGTTCAGAGCAAATAGAACAGTTTAATCAACAAAAACAAGATTTGGGTTTTCTCAGAGGCTTCCTTGCTGCATTCAAAGAACAGATTCATACAGATATATTGATTAGTCCAGGCAATCATGGTCCACCTATTCCCGCACATAAATCCGTTTTGGCTGCAAGATCAGAAATTTTCGAGAACATGCTGGAGTGTGACGAATGTAAAGCTGCACCAACTTGTAACACAATAACTATACCTGATTTGAACCATGAAGAGCTAGAATCACTGTTAGAGTTTCTCTACAGTGGAACATTGGCATTGGAAAAATTGGAGAAACATGTGTATGCTTTGTCACAAGCAGCTGATAAGTATATTATTCCACACTTGTTGAAATACTGTGAAAGATTCTTGCTTAACTCAATAAGCAGTTCTAATGCATTTGAGACACTAGAGATTGCTGATACTTGTTCAAACCAAAATTTGAAGGAGACAGCTTTTAATTTCTTAGTTAAGAATATTGAGTTTATGGTTTCTTCTCCTAAGTTTGAAGCTTTTGTGCATAGGTGTCCACATTTAACTGTGCAGCTAGTTACAAGGGCGTTTGTGAATGGTTCCAAATAA 807 0.3717 MDCCVCTTMPLILRPPRNTICGTCYEGVRSIINMMNGLESDKTKAITNPTDSPVSRRNSSKTLDDCIRLCSEQIEQFNQQKQDLGFLRGFLAAFKEQIHTDILISPGNHGPPIPAHKSVLAARSEIFENMLECDECKAAPTCNTITIPDLNHEELESLLEFLYSGTLALEKLEKHVYALSQAADKYIIPHLLKYCERFLLNSISSSNAFETLEIADTCSNQNLKETAFNFLVKNIEFMVSSPKFEAFVHRCPHLTVQLVTRAFVNGSK 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01746 268 ProSiteProfiles BTB domain profile. 100 171 IPR000210 GO:0005515
Vifa2g01746 268 Gene3D - 204 267 - -
Vifa2g01746 268 SMART BTB_4 100 203 IPR000210 GO:0005515
Vifa2g01746 268 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 20 267 IPR044784 -
Vifa2g01746 268 Gene3D Potassium Channel Kv1.1; Chain A 67 203 IPR011333 -
Vifa2g01746 268 CDD BACK 204 244 - -
Vifa2g01746 268 Pfam BTB/POZ domain 94 202 IPR000210 GO:0005515
Vifa2g01746 268 SUPERFAMILY POZ domain 84 203 IPR011333 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Vifa2g01746 BTB 8e-21 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01746 K10523 - gmx:100777561 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01746 2 451043944 451045067 Vifa2g01746 2 451043944 451045067 ECH