Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01734 ATGGATGTTATAAATTCTACAGTAATATGCATACATCCTTCTAATAATTATCACGAGAGTGTGTGGAGGTTAGGAAACCCACTTGCTTCCCCCACTCCTCTTCTCTTTCTGCAGGTTTCACTTATTACTGTAGTCACACAACTCATGGATGCTTGTCTCAAACCATTAGGACAAACCTCCCTTGTATCTCAAATTCTCGGAGGATTGGTATTTGGTCCATCAATGTTGGGGCACAAAGAGATGGTGACACGCATCTTATTCCCTATGAAAGGTTCTCTAATACTTGACACAGTAGCAAGTTTCTTCCTCAATTTCTTCTACTTCATATGTTGTGTAAAGATAGATACTGGAACAATGCTGAAAACAGAAAAACAAGCCATGACAATTGGTATTTCTGTATTCGCATTTGCATTTGTAATCCCTCTTGGATTATCCTTTGCATTGACCAGTTTTGTTTCCATGGACAAAACCCTCGCCGCTGCTCTCCCATTAATAGCCATGTCGCAAAGCTTTACGGTATTCATCAGCATATCAGTCCTTCTAACAGAGCTTAAAATCCTAAACACCAATGTCGGCCGTCTAGCATTATCATCGGCGATGTTTACCGATGTTGTTAGTATCCCTACGGTAACACTTATATTTGCAGTATTGCATGTTAAACATAGTAATAAGAGTATGCTGACACTACTATGGATCCTTCTATCCATAGGTGCACTTGTGGTTGTTATCATCTATGTAATAAGGCCGACTATAATATGGTATGTAGGCCGGTTAAATGGAAATCCGATCGACGAACTTTGCATTGTCTGTATCATTTTGTGTGTTCTCTTCACTTCATTTTGCAGTGAGTTCATTGGACAGCACTATGGTATGGGGCCAATAGTTTTAGGCTTGGTTGTTCCTGAAGGGCCGCCTTTAGGATCGACTTTGATTACGAAAATGGAAACGGTTTTTGTTGCCTTTTTGTATCCATTATACCTTGCTGTCAATGGATTGCAGACTGATATATTCAAAATCAGCTTTCAGGCTACTTGGATTATAACTGTGATAGTGATAGTTGGTTTTGTCGCAAAGATCATTGCTGTTATTTTGCCAGGTTATTATTACAATGTTCCCATGAAAGATTGTGTTCTGATTGGGCTAGTTCTCAATGGCAGAGGTATAGCTGAGCTCTCCATGTACAATTTAATGAAGAACGGCCAGCTACTAACAGGACAACTGTTCTCTTTGTTGGTGGTGACCCTTATAGTGATAAATGGTATCATAGCACCACTGGTAAAATTGACATATAATTCTTCAGTCGAGTATCATTCAGCAAAAAGAATTTCAATTCAACATATAAAGCGAGATTCCGAGCTCCGAATCATGGTATGCTTTAACAAGAATGAAAACATCCCAACAATGCTCAACATCATAGAAGCATCGTGTGCAAGCAGAGAGAGCAATGTTGAAGTTATAGCACTTCTCCTTGTAGAGCTTCTTGGAAGGTCAAGGCCTCTTCTTGTCGCTCACCAACCACATGACACGCTTCCGATAACCAATTGTGATTCAACTCAACTGGACAACGCATTGAAGCAATATGCACAGCTCAATGATGGGTGTGCACATGTTCAATCATTCACATCAATCTCCGACTTCGACACAATCCACGAGGACGTCTGTGGAATATCCTTCGACAGAAGAGCCAACATTTTGATCATGCCATTCCACAAAAGATGGGAGATAGATGGAACGGTTGAGGTAAAAAATAGAGGAATCCAAACAATAAACATTAAAGTCCTCGAAAGAGCGCCTTGTTCAGTCGGAATCCTCATAGACCGAGCTATCTTAAGCGGTTGTCCATCGCTTTTATTCGGCAAACCAACATACTATGTAGCAGTAATCTTCATTGGAGGTGCAGACGATGCTGAAGCACTAGCCTATGCTAGTAGAATGGCTAGGCACGAGCGTGTGAATGTAACAGTTATTAGGTTCCTTGTTTTTGGAGAAGAGAATTCAAAAGATAGAAAATATGAGACCGATCTTGTAGATGAATATAGAAATTATAACAATGGAAATAGCAGGTTTGAGATAAGTGAAGAAGTTGTGAGAGATGGAATAGAATTTTTTTCTAGTGTAAGAAGAATGGTAGATTGTTTTGATTTAGTTATGGTAGGGAGGTCACATCCACAATCAGTTTTGTTACATGGACATGAGCAATGGAATGAGTGTCCCGAGTTAGGTGTGGTTGGTGATATGTTGGCTTCACAGGATTTTGCGACAAAAGCATCAGTGTTGGTTGTGCAACAACAAAGAATGGGAGGGAAATTCATTAACCAACATGTTATGCCAAGTCAAAGAGATCAGCTTGTACATAACGTTCCAATGAATGAACCACCAATACCTTCTTGTACCATTTCAATGGATAAATAG 2412 0.3984 MDVINSTVICIHPSNNYHESVWRLGNPLASPTPLLFLQVSLITVVTQLMDACLKPLGQTSLVSQILGGLVFGPSMLGHKEMVTRILFPMKGSLILDTVASFFLNFFYFICCVKIDTGTMLKTEKQAMTIGISVFAFAFVIPLGLSFALTSFVSMDKTLAAALPLIAMSQSFTVFISISVLLTELKILNTNVGRLALSSAMFTDVVSIPTVTLIFAVLHVKHSNKSMLTLLWILLSIGALVVVIIYVIRPTIIWYVGRLNGNPIDELCIVCIILCVLFTSFCSEFIGQHYGMGPIVLGLVVPEGPPLGSTLITKMETVFVAFLYPLYLAVNGLQTDIFKISFQATWIITVIVIVGFVAKIIAVILPGYYYNVPMKDCVLIGLVLNGRGIAELSMYNLMKNGQLLTGQLFSLLVVTLIVINGIIAPLVKLTYNSSVEYHSAKRISIQHIKRDSELRIMVCFNKNENIPTMLNIIEASCASRESNVEVIALLLVELLGRSRPLLVAHQPHDTLPITNCDSTQLDNALKQYAQLNDGCAHVQSFTSISDFDTIHEDVCGISFDRRANILIMPFHKRWEIDGTVEVKNRGIQTINIKVLERAPCSVGILIDRAILSGCPSLLFGKPTYYVAVIFIGGADDAEALAYASRMARHERVNVTVIRFLVFGEENSKDRKYETDLVDEYRNYNNGNSRFEISEEVVRDGIEFFSSVRRMVDCFDLVMVGRSHPQSVLLHGHEQWNECPELGVVGDMLASQDFATKASVLVVQQQRMGGKFINQHVMPSQRDQLVHNVPMNEPPIPSCTISMDK 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01734 803 Gene3D - 34 437 IPR038770 -
Vifa2g01734 803 PANTHER CATION/H + ANTIPORTER 9 765 - -
Vifa2g01734 803 Pfam Sodium/hydrogen exchanger family 42 426 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01734 Vifa-Chr2 447739641 447742309 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01734 5 763 Antiporter Super Family AT2G13620 35.451 5.72e-154 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01734 K26731 - gmx:100779700 983.4