Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01733 ATGGATACTATAAATTCTACAGTAATATGCACTAGTCCTCTTCTTGATACTCACACAAATGTGTGGATGTTAGGCAACCCACTTTCTTCCCCCACTTCTCTTCTATTTCTGCAGCTCTCTATTATTACTATAGTCACACAATTCTTGGATGTCTGTCTCAGACCACTAGGACAAACCTCTCTTGTTTCTTATATTCTTGGAGGATTGGTATTTGGTCCATCCATTTTGGGGCACAAAGAGACGCTGACAAGATTCTTATTCCCTATGAAAAGTGCTTTAGTACTTAACACAGTGGCAACTTTCTTCCTCGGTTTCTTCTACTTCATATGTTGTGTAAAGATGGACACTGCAACAATGCTGAAAACAGAAAAACAAGCCATCACAATTGGTCTTTCGGTTTTCTTACTCACATTTATAATCCCTCTTGGATTATCCTTTGCATTGATCAGTTTTGTTGGCATGGACAAATCTCTCATTGAGGCTCTCCCTTTAATAGCCATCTCGCAAAGCTTAACCGTGTTCATCAGCATATCAGTCCTACTAACAGAGCTTAAAATCCTAAACACAAATGTCGGCCGTCTAGCATTATCATCCGCGATGTTTACCGATGTTTTTAGTTTCTCTATAACAGTATTTTTATTTGCAGTGTTGCAGGTTAAGACTAGTAATAAGAGTATGCTGACACTAGTATGGATTCTTCTTTCCATAGGCGGACTCATTGTTTTTATCATATATGCACTGAGGCCGATTTTAAAATGGTACATAGCTCGATTAAACGGAAAGCCAGTTAGCGAAGTTTGCATTGTCAGTATCTTTTTATGTGTTCTCCTCTGTGCATTTTTGAGTGAAGTCGTTGGACAGCACTATGTTATGGGAATTGTATTTTTTGGCCTAGCTGTTCCTGAAGGGCCGCCTTTAGGATCGACTTTGATTTCGAAATTGGAAACACTTACTTGTGGTTTTATGTATCCATTATACCTTGCTGTCAGTGGATTACAGACTGATATATTCAAAATCAACATGCACACTAGTTGGATTATAACTGTCGTAGTGATGGTCTCTTTTTTCGTAAAGATAGTTGCTGTTATGTTGCCAGGTTATTATTACAAGGTTCCCATGAGAGATTGTTTTGTGATTGGGCTACTTCTCAATGGCAGAGGTATAGCCGAGCTCACGTTATACAATGTCTGGAAGGAAGGCAAGCAACTAACAGGACAACAGTTCTCTTTATTGGTGCTGACCCTTCTACTCATAAATGCTATCATAGCACCACTGGTAAAATTCGTACTTAACCCTTCAGGTCAATATCGTGCTGGAAAAAGAAGTTCAATACAACATATGAGGCGAGACTCCGAGTTCCGACTCATGGCATGCTTTTACAAGAACGAAAGCAGCACAACAATGTTCAACATCATAGAAGCATCATGTGCAAGCGTAGAAAGCAATGTTACTGTTATAGCACTCCTCCTTGCAGAGATTCTTGGAAGATCAAGGCCTCTTCTCGTGGCACACCAACCTCATGATACGCTTCGGACAACAAGTTGCTATTCAGCTCCACTCGACAAAGCATTGAAGCAATATGCACGGCTCAACGATGGGTGTGCACATGAAGAATCATTCACATCCATTTCCGACTTTGACACAGTCCACGAGGACGTCTGTCGAATATCCCTCGACAGAATAGCCAACATTTTGATCATGCCATTCCACAAAAAATGGGAGATAGATGGAACGGTCGTGGGAAACAATAGAACAATCCAGACGATAAACATTAACGTACTCGAAGGAGCGCCTTGTTCAGTCGGAATCCTCATCGACCGAGCTATCCTAAGCGGCTCTCCATCGCTATTGCTAGGCAAGTCAGCATACTATGTAGCAGTAATCTTCATTGGAGGTGCAGATGATGCTGAAGCACTAGCCTATGCTAGTAGAATGGTTAGACACGAGTGTGTGAATGTATCAGTTATCAGGTTCCTTATATTTGGAGAAGAGAATTCAAAAGAAAGAAAACGTAACACTGATCTTGTAGAAGATTATAGATATTATAATACCGGAAATAGAAGATTCGAGATAACTGAAGAAGTTGTGAAAGATGGAATAGAATTTTCGTCTATTATAAGAAGAGTTATAGATTGTTTTGATTTAGTTATGGTAGGGAAGTCACATCCACAATCAGTTTTATTACATGGACATGATCAATGGAGTGAGTGTCCTGAGTTAGGTGTGATTGGTGACATGTTGGCTTCACCGGATTTTGTGACAAAGGCATCTTTGTTGGTCGTGCAACAACAAAGAATGGGAGGGAAATTCACTACGCATAATGTTACGCCAAGTCAAAGGGATCAGTCTGTACGTGATGTTTCAATGGGTGGATCACCAATACCTTCTTGTAGTATTTCAGTGGGTAAATCTGACATATAA 2421 0.4019 MDTINSTVICTSPLLDTHTNVWMLGNPLSSPTSLLFLQLSIITIVTQFLDVCLRPLGQTSLVSYILGGLVFGPSILGHKETLTRFLFPMKSALVLNTVATFFLGFFYFICCVKMDTATMLKTEKQAITIGLSVFLLTFIIPLGLSFALISFVGMDKSLIEALPLIAISQSLTVFISISVLLTELKILNTNVGRLALSSAMFTDVFSFSITVFLFAVLQVKTSNKSMLTLVWILLSIGGLIVFIIYALRPILKWYIARLNGKPVSEVCIVSIFLCVLLCAFLSEVVGQHYVMGIVFFGLAVPEGPPLGSTLISKLETLTCGFMYPLYLAVSGLQTDIFKINMHTSWIITVVVMVSFFVKIVAVMLPGYYYKVPMRDCFVIGLLLNGRGIAELTLYNVWKEGKQLTGQQFSLLVLTLLLINAIIAPLVKFVLNPSGQYRAGKRSSIQHMRRDSEFRLMACFYKNESSTTMFNIIEASCASVESNVTVIALLLAEILGRSRPLLVAHQPHDTLRTTSCYSAPLDKALKQYARLNDGCAHEESFTSISDFDTVHEDVCRISLDRIANILIMPFHKKWEIDGTVVGNNRTIQTININVLEGAPCSVGILIDRAILSGSPSLLLGKSAYYVAVIFIGGADDAEALAYASRMVRHECVNVSVIRFLIFGEENSKERKRNTDLVEDYRYYNTGNRRFEITEEVVKDGIEFSSIIRRVIDCFDLVMVGKSHPQSVLLHGHDQWSECPELGVIGDMLASPDFVTKASLLVVQQQRMGGKFTTHNVTPSQRDQSVRDVSMGGSPIPSCSISVGKSDI 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01733 806 Gene3D - 33 438 IPR038770 -
Vifa2g01733 806 PANTHER CATION/H + ANTIPORTER 9 765 - -
Vifa2g01733 806 MobiDBLite consensus disorder prediction 770 786 - -
Vifa2g01733 806 Pfam Sodium/hydrogen exchanger family 43 426 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vifa2g01733 806 MobiDBLite consensus disorder prediction 770 806 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01733 Vifa-Chr2 447293892 447296457 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01733 3 763 Antiporter Super Family AT2G13620 32.996 1.91e-142 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01733 K26731 - gmx:100779700 964.14