Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa2g01709 | ATGAGAGGCACAAAGGGTTATGAGCCACGTTCAAGCTCATCTTGTGCAGCTTGCAAATTACTAAAAAGAAGATGCACACCAAACTGCCTATTTGCACCTTACTTCCATTCAAACGAGTGCAAGAAATTCGCCAAAGTCCACAAAGTATTTGGAGCAAGCAATGTTAGCAAAATACTCATCGAAGTCCCAGAAAAACAGCGAGAAGACACGGTAAATTCTTTGGCTTATGAAGCAGAGGCAAGACTTAGAGACCCAGTTTATGGATGCATTGGTGCCATAGCTTTGTTGCAGAGAAAGATGATGGAGCTTCAACATGATCTCGACATTGCTAAAGATCGTCTTGCTCACTGTCGCGCTATCGCTGCCACTGCCACTGCTACAACCACCGCCGCAATTCGTCTATCGATACTTGATATCTTCTGTCATGGCTCTTCTTCTCAATTATCGACCCGGCTTGAAACCGTCGACGATTTTAATCAAATTCCATATATATTTTGA | 498 | 0.4317 | MRGTKGYEPRSSSSCAACKLLKRRCTPNCLFAPYFHSNECKKFAKVHKVFGASNVSKILIEVPEKQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMMELQHDLDIAKDRLAHCRAIAATATATTTAAIRLSILDIFCHGSSSQLSTRLETVDDFNQIPYIF | 165 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa2g01709 | 165 | Coils | Coil | 93 | 113 | - | - | |
Vifa2g01709 | 165 | ProSiteProfiles | LOB domain profile. | 13 | 114 | IPR004883 | - | |
Vifa2g01709 | 165 | Pfam | Lateral organ boundaries (LOB) domain | 14 | 111 | IPR004883 | - | |
Vifa2g01709 | 165 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 12 | 120 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa2g01709 | Vifa-Chr2 | 442827388 | 442827932 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa2g01709 | 5 | 164 | AS2 family | AT3G11090 | 59.146 | 8.80e-63 | 189 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Vifa2g01709 | LOB | 6.1e-38 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa2g01709 | - | - | cam:101504923 | 264.233 |