Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01707 ATGGGAAGTTCGGTGCGTGTTAAAGAAGCTGTGGTGGTAACCCCTTCAGAGCCCACACCAAGCTGTGTGATGTTACTTTCATCTATAGACTCACAACTTTTTCTCCGCTTCACCATTGAATATCTTTTAATTTACAGGCCCGGCCCGGGCCTCGACAAGGTTACAACCACTGCTCGTTTAAAAGCTGCATTAGCTAAAGCTCTGGTTCCTTATTACCCATTGGCTGGGAGAGTACGGCCCAGCCCAAATAGCACGGGCCTGGAGGTTGTTTGTCGAGCTCAAGGTGCGATTTTCATTGAAGCCGTTAGTGATCGTTACACTGTCAACGAATTCGAGAAAGTTCCAAAAACGGTTTTGCAGTGGAGAAAACTCTTGTCCGTTAGCGTCCCTGACGTTCTCAACGGATCGCCACCGCTGATTCTTCAGCTGACATGGCTATCCGACGGCGGTGCAGCTTTGGGAATCGGAATCAATCACTGTATCTGCGATGGTATTGGCGGAGCTGAATTTCTCAACTATGTCGGAGAGTTGGCTTCGGGAAGACAAGGATGTCCAAAACCAAAAGCCGTTTGGGATCGTCACGTGTTCAATGTAAAACCTATGATTCGTGGTGATTCGCTGAGTCACCCCGAGTTCAACAGAGTGCCGGATCTATGCGGGTTCATGAACCGTGTCACGAATAATCTCAAGCCAACTTGTGTTATATTCGACAAGAGACGATTAACCGAACTCAAAGGTGTAGCTCGACGCACGTGTCAAATCGCTGACTCGTTTTTTACCTCGTTTGAGGTGCTTGCAGCGCACGTGTGGAGGAGCTGGGCGAGAGCAGTGGTGTTCCCGCCGAATCAGATACTGAAGCTGTTGTTCAGCGTGAACGTACGGAACCGGGTCAAACCGGGTTTACCTGATGGATACTACGGAAATGCGATCGTAATGGCGTGCGCGCAGGCGAGTGCGAGGGAACTAGGAGAAAGAGGAATCGGGTACGGGTCGGGTTTGGTGAAGAAAGCAAAGGAGAGAGTGGATAATGAATATGTGAAGAGGGTGGCTGAGTTGGTGTCCGAGTCAAGAGCGAGTCCTGACTTGGTGGGTGTGTTGATACTGACGCAGTGGTCGAGGATGGGTTTGGACAGAGTTGAGCTTGGAATGGAGAAGCCGGTGTTTGTGGGACCCATTTGCAACGAAAGGTACTGTTTATTTGTGCCGGTGAAGTGTGAAAGAGACAGTGTCAAGGTCACGGTGGCTGTTCCCGCCGCCGCATTTGATAATTACCATCGCTTCCTCCGGGAATAG 1293 0.5027 MGSSVRVKEAVVVTPSEPTPSCVMLLSSIDSQLFLRFTIEYLLIYRPGPGLDKVTTTARLKAALAKALVPYYPLAGRVRPSPNSTGLEVVCRAQGAIFIEAVSDRYTVNEFEKVPKTVLQWRKLLSVSVPDVLNGSPPLILQLTWLSDGGAALGIGINHCICDGIGGAEFLNYVGELASGRQGCPKPKAVWDRHVFNVKPMIRGDSLSHPEFNRVPDLCGFMNRVTNNLKPTCVIFDKRRLTELKGVARRTCQIADSFFTSFEVLAAHVWRSWARAVVFPPNQILKLLFSVNVRNRVKPGLPDGYYGNAIVMACAQASARELGERGIGYGSGLVKKAKERVDNEYVKRVAELVSESRASPDLVGVLILTQWSRMGLDRVELGMEKPVFVGPICNERYCLFVPVKCERDSVKVTVAVPAAAFDNYHRFLRE 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01707 430 Gene3D - 2 213 IPR023213 -
Vifa2g01707 430 Pfam Transferase family 4 420 - -
Vifa2g01707 430 Gene3D - 222 427 IPR023213 -
Vifa2g01707 430 PANTHER ACYL TRANSFERASE 4 4 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01707 Vifa-Chr2 442155923 442157215 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01707 5 430 Monolignol Biosynthesis Gene Families AT5G48930 26.984 3.32e-46 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01707 - - psat:127083994 800.816