Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01680 ATGGCAAATTACTATGATATTGATGACATTTTGGTGGAGGAAGAGATTGTGTCGGTTAAATTTCTGAAGGAAGCATCTGGAGTGGGAATAGATCCCAGTTCTGAGGCAGACTTTATTGAAGTGGATTCAAAAGTTGAACTGCCTTTTTGGCTGGCTCATGAGTTACAGTTGAGACAAGCAGTATCAGTCTATGTTCCTCCTTGTTTCAATCAAAAAACAAGACTAGAGATCCAAGCTGATTGTGCATCTGTGGATCTGAGGTCCAGATGTCCATACTTCTATGAATTTGGTTGCAAGATAGCACCCATAGTTGGTGACAGAACCATCGGGGTTCTGTTGTTGTCTGCATTTAGGAATAGGTACAAGGAGATCCTCACAAAGGCACACACTGCAGCAATTGCTGCTGGTTCTAAATTTTGGACTATTCTAACAAACGAGGAGATCAATTTGTATGAGACAGCTCAATCCGCAATGGCATCCTTCAAGAAGTGGCGAATGGGGGGCCCCAGATTTCAGATAGCTTCTATTCTTGGAAGAAAGAGAAAACCAGCTGAATAG 558 0.4229 MANYYDIDDILVEEEIVSVKFLKEASGVGIDPSSEADFIEVDSKVELPFWLAHELQLRQAVSVYVPPCFNQKTRLEIQADCASVDLRSRCPYFYEFGCKIAPIVGDRTIGVLLLSAFRNRYKEILTKAHTAAIAAGSKFWTILTNEEINLYETAQSAMASFKKWRMGGPRFQIASILGRKRKPAE 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01680 185 Gene3D - 1 167 IPR038437 -
Vifa2g01680 185 SUPERFAMILY GINS helical bundle-like 65 166 IPR036224 -
Vifa2g01680 185 PANTHER UNCHARACTERIZED 1 183 IPR010492 -
Vifa2g01680 185 CDD GINS_B_Psf3 4 66 - -
Vifa2g01680 185 Pfam GINS complex protein 45 147 IPR021151 -
Vifa2g01680 185 SUPERFAMILY PriA/YqbF domain 1 66 - -
Vifa2g01680 185 CDD GINS_A_psf3 61 167 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01680 1 182 Core DNA Replication Machinery Family AT3G55490 69.231 1.69e-93 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01680 K10734 - gmx:100799874 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01680 2 437928673 437932574 Vifa2g01680 2 437928673 437932574 ECH