Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01663 ATGGCAAAGCCTTTTTCTAATGATTCTAGTGCAGTCACCATCCTCTCAAAGTGCACTGTTTTTCCAGACAAAAAGTCATCTCTTGGAGACTTAAAACTCTCTGTCTCAGACCTCACCATGATATGTTCTCAGTACATCCAAAAAGGTTGTCTCTTCCCAACACCATCTGTCCCCTCTCAAACACTCATTCCTCACCTTAAAACTTCTCTCTCCAAAACCCTATCTCTATTCCCTCCACTGGCTGGCCGTTTGGTAACTGACCCCGATGGTTACATCTACATCTCATGCAACGACGCTGGCGCTGATTTCATCCATGCAAACGCCACTCACCTAACTACCAACGACCTTTTGTCACCGTCTGATGTCCATGCTGCCTTCAAGCAATTCATCCCTTTTCACTGTAAAATCAACTACTCCGCTCATTTCTCACCAATCTTGGCTATCCAGGTCACTTACCTCGCTGACGGAATCTTCATCGGTTTCGCCGTATCCCACGCTGTCTCAGACGGTACTACCGTCTGGAACTTCTTCAACACGTTCGCTGAGATTTCCAGGGGAGTCACACAACCTAGTAGAATCCCGAACTTTCGCCGGGATTCCATTCTCAACTCAAAAGCCGTCCTCCATTTACGAGAGGACGACATCAATGTAACTCCCAAAACTGACGAGCCTGTACGTGAGAGAATTTTCACTTTCACTCGCGAAGCAATTCAGAAGCTAAAAGCAAGAGTGAATCGCAACCATACATCACCGGCGGAGATCTCATCGTTCCAGTCGCTCTCCGCTCTAATGTGGCAATGTGTTACACGCGCTAGGAAACTTGAGGGCACAAAAACAACGACTGTTAGAATAGCGGTGAATATTCGTAACCGTTTGGAGCCGAAGTTATCGGAGTATTATTTCGGTAACGCGATTCAGAGCATTGCTACGTATGCATCTGCATGTGATGTGGTTGATAAGGATCTTACGTGGTGCGCGGAGCAGTTGAATAAGAATATTAGGGAGTACGATAGTGATAAAGTGAGGCGCGTCGTAGAGGATTTCGAGCGCGAGCCAAAAGCGGTTAAGAAGGGGAATCATGATGGTGGGATAGTGCAGATTGGTAGTTCGCCTAGGTTTCCGATGTATGATAATGATTTTGGATGGGGGAGGCCGGTGGCGGTGAGGAGCGGCGGAGGGAATAAGTTTGATGGGAAGATGTCGGCGTTTCCGGGAAAGGAAGGCGGTAATTCAGTGGACATGGAGGTGGTTTTGGCTACAGAAACGATGAGGATTCTTGAGAATGATCCTGAGTTTTGCTTTACGCTTCTTGAGGAATGA 1320 0.4727 MAKPFSNDSSAVTILSKCTVFPDKKSSLGDLKLSVSDLTMICSQYIQKGCLFPTPSVPSQTLIPHLKTSLSKTLSLFPPLAGRLVTDPDGYIYISCNDAGADFIHANATHLTTNDLLSPSDVHAAFKQFIPFHCKINYSAHFSPILAIQVTYLADGIFIGFAVSHAVSDGTTVWNFFNTFAEISRGVTQPSRIPNFRRDSILNSKAVLHLREDDINVTPKTDEPVRERIFTFTREAIQKLKARVNRNHTSPAEISSFQSLSALMWQCVTRARKLEGTKTTTVRIAVNIRNRLEPKLSEYYFGNAIQSIATYASACDVVDKDLTWCAEQLNKNIREYDSDKVRRVVEDFEREPKAVKKGNHDGGIVQIGSSPRFPMYDNDFGWGRPVAVRSGGGNKFDGKMSAFPGKEGGNSVDMEVVLATETMRILENDPEFCFTLLEE 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01663 439 Gene3D - 11 216 IPR023213 -
Vifa2g01663 439 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 14 432 - -
Vifa2g01663 439 Pfam Transferase family 11 432 - -
Vifa2g01663 439 Gene3D - 223 430 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01663 Vifa-Chr2 434011554 434012873 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01663 36 436 Monolignol Biosynthesis Gene Families AT5G48930 29.551 1.60e-46 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01663 - - psat:127083931 772.696