Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01632 ATGGGAAAGAAACGGAGCTCTTCTCAAATCGAGAAGCTTTCCACCACCGCCGCTCCCAAAGACGACCAGCCACTCACTCCCGCCCCGAAAGACGACGAAAAACCGACGCCTCCACGTCCGGAAGAAGGCAAGGTTGAAGAACAAGATGATGAAGATTTATCATCCGCTTCTTCTTCATCTGAAGCGGAAGATGAAGATGAAGATGAAGCGGAAGATGATGACGAAGAAGACGATTCTTCCAAAAACGCTACTCCACCTGCCAACTCTCATCCGAATCCAAAAACTGAAGATGATTCGGACTCTGAAGACGAAGAAACCGATTCAGACTCTGAAGATGAACCAGCCCCCAAACTGAAATCCCTCAACTCAAGCTCAAAGCCTCTTGATCAGATCAAATCAAAGGCCGAACCAAAACCCTCTGCCGCACCGGCCAGATCTGGAACCAAACGTCCTACTCCTGACAACGATCCCAAGCAAGCGAAGAAGACGAAAACTGGCGAGGAGGACAATAAGAAATCCGGTGATGATTCTAAAAGGCTGTTTCAGAGAGTGTTCAACGAGGATGATGAAATGGCCATTATCAAAGGTCTGTATGATTTCATTACAAAAACACAGACCGATCCTTTCAAGTACCACTCGGCTTTTTACGAGTTTGTGAAAAAGTCGATCCACTTTAAAGTTACACTGGAGCAGCTCAGAGATAAGATTCGGAGGCTGAAGCATAAATACGAGACGAAAGCAAAGACTGGAAAGACTCCTAATTTCTCCAAACAGAATGACCGGATAATATTTGAGTTTAGCCAAAAGATTTGGGGTGGTAAATTCAATGTCAATGAAGCCGAAGAGAAGGGAAAACCTAATGGGAAACTTTCCCAGAAGGAACCTGCTGCTAAGAAACCAAGAACAACTAAGAAATTGGTTTTGGAACCTGATTCGCCGATGGTTGTGAAGGAAACCAGGAAGGTGGAAAGAACTGATACGGAGAATCGCGGTCCGAGTTTGGCTTTGAATGAACTGATTCGTTTTGACGAGAGTGTAAGTGCAACTCGGGAGACTATAGGTGCGATGAAGAGGGGAATGGAGTTGATTGAGGAATCAGAGAGGAAAGAGTTGGCGAGAAGGTGGGAGAAGGTGCAAATTGCTGAAATGGAGGTGTTTAAGATGAGAGCTGATTTGGCTGTGGATCAGGCTATGTCGATATTGGATGCATTGAAGTCATCATCAAGCGATTAG 1233 0.4542 MGKKRSSSQIEKLSTTAAPKDDQPLTPAPKDDEKPTPPRPEEGKVEEQDDEDLSSASSSSEAEDEDEDEAEDDDEEDDSSKNATPPANSHPNPKTEDDSDSEDEETDSDSEDEPAPKLKSLNSSSKPLDQIKSKAEPKPSAAPARSGTKRPTPDNDPKQAKKTKTGEEDNKKSGDDSKRLFQRVFNEDDEMAIIKGLYDFITKTQTDPFKYHSAFYEFVKKSIHFKVTLEQLRDKIRRLKHKYETKAKTGKTPNFSKQNDRIIFEFSQKIWGGKFNVNEAEEKGKPNGKLSQKEPAAKKPRTTKKLVLEPDSPMVVKETRKVERTDTENRGPSLALNELIRFDESVSATRETIGAMKRGMELIEESERKELARRWEKVQIAEMEVFKMRADLAVDQAMSILDALKSSSSD 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01632 410 PANTHER BNAANNG10740D PROTEIN-RELATED 56 401 IPR007592 GO:0006355
Vifa2g01632 410 MobiDBLite consensus disorder prediction 151 178 - -
Vifa2g01632 410 MobiDBLite consensus disorder prediction 7 21 - -
Vifa2g01632 410 Pfam Protein of unknown function, DUF573 181 272 IPR007592 GO:0006355
Vifa2g01632 410 MobiDBLite consensus disorder prediction 25 44 - -
Vifa2g01632 410 MobiDBLite consensus disorder prediction 280 304 - -
Vifa2g01632 410 MobiDBLite consensus disorder prediction 45 79 - -
Vifa2g01632 410 MobiDBLite consensus disorder prediction 1 178 - -
Vifa2g01632 410 Coils Coil 229 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01632 Vifa-Chr2 433531469 433532701 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01632 95 272 GeBP Transcription Factor Family AT1G61730 40.860 1.27e-25 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Vifa2g01632 DUF573 1.5e-26 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01632 - - tpra:123884521 309.301