Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01630 ATGCATGTTATCATGTTATTGGATATAACTTCATCTCTACCAGACAATCCATCTCTCTTCAGGCAGTTTTTGGCAGCAATGACGCATTTGATGACCATGGCTCGTATTCATGACGAAAGCCTAAAATATGTACTAAACGGGTTTGAGCTATCAGAGGATAACAAAGAACCCGATTTCATGACTGAGTATGTGGTTACTCGGTGTTGCATACTTGGTGACTTGATCCACGGTGGAACTTACATAGAGGTGGAGGGGCAGGAGATGATGGTAAAGGTGAACCTAGATTGTACTGGTCTGCAGCATTCTTCTAATTGGCCACTTTCAAGATCACATTGGATGTGCCTTCCGACCTTGATTATGCAGGATGATGCAGTTTTTCTTCAACCGGAGCAGGTGGTTACTACAATGCTGACTAGGTGCTGTAATGTGTTACAAAATAGTTCAGTCATTGTAAATTTTATTCCTGCTATTGGCACTATCATTTTTGCAGTATGGGGTGTTGTCCCATTAATTTTTCAGACAAGGAAACATTTTTTTCAGAGGAGTGATAATAGTTGGAAAAAATGGCTTTTGCCCATTGTTTATCAAGAGGGTTGCAACGAACTCACAACTATGGGAAATATTATAGCTGTTGCTGTTGGGGCTGCAACAACAATATCTACAAATCCATTGTGGGTTGTTAAGCGAGCCTGTCAACAAAATACCCGAGATCCTACCTATTTTATTGCGCCGGTTTTACAATCTCGCGCAAGTCGTCAAGATTTGAAAAAGATCTTCGAAGCCTGGTATGAGAAAAGGCAAATGACGAAAATCTATTCACCACTTCTGGAAGGACTATTGGCTCTCTACCTCGGTTTTGAGTGGATCCAAATAATGATTTCATCTTTTGAAAATATTGATTATCTTTTGTATGATCTAAGCAACTAA 927 0.3991 MHVIMLLDITSSLPDNPSLFRQFLAAMTHLMTMARIHDESLKYVLNGFELSEDNKEPDFMTEYVVTRCCILGDLIHGGTYIEVEGQEMMVKVNLDCTGLQHSSNWPLSRSHWMCLPTLIMQDDAVFLQPEQVVTTMLTRCCNVLQNSSVIVNFIPAIGTIIFAVWGVVPLIFQTRKHFFQRSDNSWKKWLLPIVYQEGCNELTTMGNIIAVAVGAATTISTNPLWVVKRACQQNTRDPTYFIAPVLQSRASRQDLKKIFEAWYEKRQMTKIYSPLLEGLLALYLGFEWIQIMISSFENIDYLLYDLSN 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01630 308 PANTHER OS03G0100030 PROTEIN 233 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01630 Vifa-Chr2 433272565 433278025 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01630 131 188 Mechanosensitive Ion Channel Family AT5G10490 32.759 1.06e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01630 - - cam:101505622 105.916