Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa2g01597 | ATGAAGGCATTGATTCTGGTTGGAGGGTTTGGAACAAGGTTGAGGCCATTGACACTCAGTGTTCCCAAGCCTCTTGTTGATTTTGCTAACAAGCCTATGATTCTGCACCAGATAGAGGCTCTTAAGGACATTGGAGTTACTGAAGTGGTGTTGGCTATCAATTACCAACCAGAGGTGATGTTGAATTTCTTGAAGGATTTTGAGGAAAAGCTCGACATCAAAATCACTTGCTCTCAAGAAACTGAACCATTGGGAACCGCAGGTCCCTTGGCTCTAGCCAGAGATAAGCTGATAGATGGTTCTGGTGAGCCTTTTTTTGTTCTCAACAGTGATGTTATCAGTGAGTATCCGCTTAAAGAAATGATAAAATTCCATAAATCCCATGGAGGAGAGGCTTCCATAATGGTGACAAAGGTTGATGAGCCATCAAAATATGGTGTAGTTGTGATGGAAGAGACCACTGGCCAGGTTGAGAAATTTGTGGAGAAACCAAAGTTATTTGTTGGATTCTGGATGGACATTGGACAACCAAGGGACTATATCACAGGCCTGAGACTCTACCTGGACTCACTGAGGAAAAATACTTCTTCCAAGTTGGCCAGTGGCCCTCACATTTTGGGGAATGTAATTGTGCATGAGACAGCCAAAATTGGTGAGGGATGTCTCATTGGACCTGACGTAGCAATTGGCCCTGGCTGTATTATTGAGTCAGGTGTCAGGCTTTCAAGCTGCACTGTAATGCGAGGAGTTCGGATTAAGAAGCATGCTTGCATATCCAGCAGCATCATTGGGTGGCATTCCACTGTCGGGCAATGGGCTCGAGTGGAGAATATGACCATCCTTGGAGAAGATGTCCATGTGTGCGATGAAGTTTACAGCAATGGTGGTGTGGTTTTACCCCACAAGGAAATCAAAACTAGCATTCTGAATCCAGAGATAGTCATGTGA | 948 | 0.4462 | MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKDIGVTEVVLAINYQPEVMLNFLKDFEEKLDIKITCSQETEPLGTAGPLALARDKLIDGSGEPFFVLNSDVISEYPLKEMIKFHKSHGGEASIMVTKVDEPSKYGVVVMEETTGQVEKFVEKPKLFVGFWMDIGQPRDYITGLRLYLDSLRKNTSSKLASGPHILGNVIVHETAKIGEGCLIGPDVAIGPGCIIESGVRLSSCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEVYSNGGVVLPHKEIKTSILNPEIVM | 315 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa2g01597 | 315 | Gene3D | Hexapeptide repeat proteins | 189 | 311 | - | - | |
Vifa2g01597 | 315 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 1 | 186 | IPR029044 | - | |
Vifa2g01597 | 315 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 1 | 266 | IPR029044 | - | |
Vifa2g01597 | 315 | CDD | M1P_guanylylT_B_like_N | 1 | 188 | IPR045233 | GO:0004475|GO:0005525|GO:0009298 | |
Vifa2g01597 | 315 | PANTHER | SUGAR-1-PHOSPHATE GUANYL TRANSFERASE | 1 | 168 | - | - | |
Vifa2g01597 | 315 | FunFam | mannose-1-phosphate guanyltransferase beta | 1 | 169 | - | - | |
Vifa2g01597 | 315 | Pfam | Nucleotidyl transferase | 2 | 166 | IPR005835 | GO:0009058 | |
Vifa2g01597 | 315 | Pfam | Bacterial transferase hexapeptide (six repeats) | 215 | 249 | IPR001451 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa2g01597 | Vifa-Chr2 | 427114411 | 427115999 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa2g01597 | 1 | 147 | Eukaryotic Initiation Factors Gene Family | AT4G18300 | 23.871 | 3.53e-08 | 52.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa2g01597 | K00966 | - | aew:130793371 | 576.63 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vifa2g01597 | 2 | 427114411 | 427115999 | Vifa2g01597 | 2 | 427114411 | 427115999 | ECH | |
Vifa2g01597 | 2 | 427114411 | 427115999 | Vifa1g01927 | 1 | 313240001 | 313241545 | PCT |