Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01543 ATGTTGCATGGAGTTCAAATGGACAGTAGTCATGTGGAAGTAAATGATCAAGAGCCCGAAACACCACAATTTTGCACTCAAGCTCAAGATGGGTTGGAAACAATCAACCTTGGTGAAGAAGTCAAAACTACATCGGTTATAAATATGTCGAAAATAAGATTTCAACCAAAGGAGGATGAACTTCTCATTCAATCATGGCTCAACATTTCAAGGGATCCAATTGTTGGGGTTGATCAAAAGGGAGATAGTTTCTGGAAGAGGATTGGTGAAGCTTATAACAACCACCGCCACAAGAATTTTCCCGAGAGGAATCCGTTGGCACTAAAAGAGTGTTGGAAATTATTGAGAGATGAACCCAAATGGCTTGGAGGTTCATCGGAACCTTCTGCAAAAAGAACAAAGAGTTCGGCTTCCGGAGCATATTCAACATCTTCTAACCCAACAACACCAACAAGCGAATACAATCCACCATCACCGACTTTGTTACATCGTCCAATCGGTAATAAGGCGGCCAAAAGGAAGCAAAAAGAAAAGTTTGTGGAAAAACCTACTCCTAAATTTGATGCTATGAAAGATGACTTAAACAAAAAAGTTGAATTAATGTCGGGGTTTGCACGTGATTATGCACGTATTGAGAGTGAAAAAATGGAGATAGAGAGGAAAAGGGTTGATGCTGAGTTGCATGCGGCAAAGATTAATGATTTGCAAATACTCTCGAAGGATACATCAAATATGACACCAAGACAACTACAAGATCACGAATTTTTGTGCGGTGTAATTAGAGATAGATATGGAGTTAAATGA 804 0.3943 MLHGVQMDSSHVEVNDQEPETPQFCTQAQDGLETINLGEEVKTTSVINMSKIRFQPKEDELLIQSWLNISRDPIVGVDQKGDSFWKRIGEAYNNHRHKNFPERNPLALKECWKLLRDEPKWLGGSSEPSAKRTKSSASGAYSTSSNPTTPTSEYNPPSPTLLHRPIGNKAAKRKQKEKFVEKPTPKFDAMKDDLNKKVELMSGFARDYARIESEKMEIERKRVDAELHAAKINDLQILSKDTSNMTPRQLQDHEFLCGVIRDRYGVK 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01543 267 MobiDBLite consensus disorder prediction 1 21 - -
Vifa2g01543 267 MobiDBLite consensus disorder prediction 128 158 - -
Vifa2g01543 267 MobiDBLite consensus disorder prediction 122 182 - -
Vifa2g01543 267 Pfam No apical meristem-associated C-terminal domain 108 249 IPR029466 -
Vifa2g01543 267 PANTHER - 42 257 - -
Vifa2g01543 267 Coils Coil 208 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01543 Vifa-Chr2 415365333 415366294 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01543 53 177 Glutathione S-transferase Gene Family AT5G41240 25.789 3.96e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01543 - - mtr:11446189 324.709