Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01542 ATGTCCACCGTCCGAATTCAAGTTTCAGCGTGCGCTCTTTCCGCCACCGTCAACCACCTTCGTTACCGTCCAAACTACGCCGTTTCAACAAGCCGCTTCAACGACCGTTTCACCTTCAGACCCCTCAGAGTTTCAATGTCTTCCGTTCCTCCTTCCGAGCCCTTGGAAATTGCTGTCAAAGCTTCTCTCACCACACCCAACAAGCTTGGAGACTGCCCTTTTACTCAAAGGGTATTGCTGACACTGGAGGAAAAACATTTACCTTATGAGACGAAATTGGTGGATTTAAGGAACAAACCAGAATGGTTCCTTGAAATCAGCCCTGAAGGTAAAGTTCCTGTGATAAACATTGATGGGAAGTGGGTTCCTGATTCAGATGTTATCACACAGATATTGGAAGAGAAGTATCCTAGCCCGCCATTGGCGACTCCACCAGAAAAGGCTACAGTTGGATCAAAGATCTTTTCTACATTTATTGGATTTCTTAAGAGCAAAGATCCTAATGATGGAACAGAACAAGCATTACTAAATGAACTAAGCATCTTCAACGATTACCTCAAGGAAAATGGTCCTTTTATCAACGGGAAAGACATATCTGCAGCTGACCTGTCACTTGGACCAAAGCTATACCATTTGGAGATTGCTTTAGGGCATTATAAGAAATGGGCGGTACCTGATTCACTTAACTTTTTGAAATCTTACTTGAAGGATATTTTCTCGAGGGAATCATTCATCAACACACGGGCACAGCCAGAGGATGTCATTGAAGGTTGGCGTCCGAAAGTGGAGGGTTGA 795 0.4415 MSTVRIQVSACALSATVNHLRYRPNYAVSTSRFNDRFTFRPLRVSMSSVPPSEPLEIAVKASLTTPNKLGDCPFTQRVLLTLEEKHLPYETKLVDLRNKPEWFLEISPEGKVPVINIDGKWVPDSDVITQILEEKYPSPPLATPPEKATVGSKIFSTFIGFLKSKDPNDGTEQALLNELSIFNDYLKENGPFINGKDISAADLSLGPKLYHLEIALGHYKKWAVPDSLNFLKSYLKDIFSRESFINTRAQPEDVIEGWRPKVEG 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01542 264 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 54 261 IPR044627 GO:0033355|GO:0045174|GO:0098869
Vifa2g01542 264 CDD GST_N_family 72 133 - -
Vifa2g01542 264 CDD GST_C_DHAR 141 261 - -
Vifa2g01542 264 Gene3D - 142 264 - -
Vifa2g01542 264 SFLD Glutathione Transferase (cytosolic) 71 221 IPR040079 -
Vifa2g01542 264 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 62 140 IPR004045 -
Vifa2g01542 264 SUPERFAMILY Thioredoxin-like 71 138 IPR036249 -
Vifa2g01542 264 Gene3D Glutaredoxin 54 141 - -
Vifa2g01542 264 Pfam Glutathione S-transferase, N-terminal domain 71 140 IPR004045 -
Vifa2g01542 264 SUPERFAMILY GST C-terminal domain-like 135 261 IPR036282 -
Vifa2g01542 264 FunFam Glutathione S-transferase DHAR3 chloroplastic 53 141 - -
Vifa2g01542 264 SFLD Main (cytGST) 71 221 - -
Vifa2g01542 264 FunFam Glutathione S-transferase DHAR3, chloroplastic 142 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01542 Vifa-Chr2 415177635 415180044 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01542 1 264 Glutathione S-transferase Gene Family AT5G16710 66.917 7.29e-128 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01542 K21888 - gmx:732557 429.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01542 2 415177635 415180044 Vifa2g01542 2 415177635 415180044 ECH