Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01529 ATGGTCAAAACAAAAACGTTCCTCTTGTTCTTCTCAATTTTCATTCTCCATTCTCTTTCCTTCTCCACAGACACATTCATCTACGGTGGTTGCACGCAACAAACATTCACCTCAACCTCACCCTACGAGTTCAACCTCAACTCCCTCCTCACTTCACTTGTCAACTCAGCAACCTACACATCCTACAACAACTTCACAATCGTCGCTTCAAATCCCAACGACGTCGTTTACGGTCTCTACCAATGCCGCGGCGACCTCTCCATGCCAGACTGCGCCTCCTGCGTATCACGCGCTGTATCACGCGCCGGTGACATATGTCCGGCAACCCGGGGTGGCGTAGTGCAGTTGGACGGATGTTACGTGAAATATGATAATGTTAAGTTTTTGGGCGTGGAGGATAAAACGGTGGTGTTGAAGAAATGTGGATCTTCAATCGGGTATGACCCGAGCACCCGAGATGCTGTGTTGGATGGGTTGGTCGGGTCGGGCGGGTATTTTCGGGTTGGTGGGTCGGGTCAGGTGAAAGGGATGGTGCAGTGTATTGGGGATTTGAGTTTTTTGGAGTGTCAGGATTGTGTTTCGGAGGCGATCCGACGGCTGAGAAGTGACTGTCCTGCGGCGGATTACGGAGATATGTTTATAGAGAAGTGTTACGCGAGGTACTCTAATGGTGGTGGAACCCATGCTTACTCCAAATCTCATGGTAAATCAGACAATGATAGTGAGAAGACATTTGCCATAATTATTGGATTATTAGCAGCTGTAGCTATACTTATAATTTTTCTAGCTTTCTTGAGAAGGATCTGTGAGGGACACCAGGGTAAATAA 828 0.4783 MVKTKTFLLFFSIFILHSLSFSTDTFIYGGCTQQTFTSTSPYEFNLNSLLTSLVNSATYTSYNNFTIVASNPNDVVYGLYQCRGDLSMPDCASCVSRAVSRAGDICPATRGGVVQLDGCYVKYDNVKFLGVEDKTVVLKKCGSSIGYDPSTRDAVLDGLVGSGGYFRVGGSGQVKGMVQCIGDLSFLECQDCVSEAIRRLRSDCPAADYGDMFIEKCYARYSNGGGTHAYSKSHGKSDNDSEKTFAIIIGLLAAVAILIIFLAFLRRICEGHQGK 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01529 275 FunFam cysteine-rich repeat secretory protein 3 23 128 - -
Vifa2g01529 275 Gene3D - 23 128 IPR038408 -
Vifa2g01529 275 Gene3D - 152 224 IPR038408 -
Vifa2g01529 275 ProSiteProfiles Gnk2-homologous domain profile. 24 128 IPR002902 -
Vifa2g01529 275 ProSiteProfiles Gnk2-homologous domain profile. 129 226 IPR002902 -
Vifa2g01529 275 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 7 269 - -
Vifa2g01529 275 Pfam Salt stress response/antifungal 31 125 IPR002902 -
Vifa2g01529 275 Pfam Salt stress response/antifungal 171 223 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01529 Vifa-Chr2 412724154 412725233 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01529 8 222 Pollen Coat Proteome AT4G20670 27.083 5.28e-20 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01529 - - gmx:100811615 361.303