Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01391 ATGGCTTCTCATCATATCCAATATTTCATTGTTATTCTTATGGCTATATTTCTCACAATTCATTCCCATGAAGAACTAACTCCTGATTTTTACAATGATGTTTGTCCCCAAGCATTGCCAATTATTCACTCAATTGTTCTCCAAAAACTTAACATGAAACCACGCATGGGAGCACATTTACTACGCTTGCATTTCCATGACTGTTTTGTCAATGGCTGTGATGGATCGGTTCTGCTGGATGATACCCCTAACTTGATAGGTGAAAAGAATGCCATCCCAAACATTGATTCCCTTAAAGGATTTATGTTGGTTGATATAATGAAAGCAGCTATTGACAAAGCTTGCAAAAGTACTGTTGTATCATGTGCAGATATATTAGCCATTGCTGCTCGTGATTCCGTCTCCATTTTGGGAGGTCCACGCTATTGGTACCAAGTGCTGCTAGGAAGAAGAGATGCAAGAGATGCTATAAAGAAAGATGCAGACTTTTATCTTCCTTCACAGCTTTTCAATTTCTCTCAACTTCTCTCTAATTTTGAGCTTCAAGGCCTAAACCTTAAAGATCTCGTAGCACTCTCCGGTGCTCATACAATTGGAATGGCTAAATGTTCTAGTTTTAGGGAAAGGATCTACAATGACACAAACATAGATCCCCATTTCGCCATTTCCATGCAAGAAAACTGCCCTAGAAAAGGCTGTGATGACAATTTTGAAGCATTTGATCATGTCACTCCTAATAAGTTTGACGATTCTTATTACAAAAATTTGATTAATAAAAAAGGTTTACTACATTCTGATCAAGAACTCTATAAAGGTGATGGTAGTGAAAGTGATAGATTGGTGAGACGTTATAGCAGAAATCCACATGCTTTTGCTAGAGACTTTAAAGCTTCTATGATTAAGATGGGTAATATAAAGCCTCTTACTGGAATATATGGAGAGATTAGAACAGATTGTAGCAAAGTTAACTCATAA 975 0.3703 MASHHIQYFIVILMAIFLTIHSHEELTPDFYNDVCPQALPIIHSIVLQKLNMKPRMGAHLLRLHFHDCFVNGCDGSVLLDDTPNLIGEKNAIPNIDSLKGFMLVDIMKAAIDKACKSTVVSCADILAIAARDSVSILGGPRYWYQVLLGRRDARDAIKKDADFYLPSQLFNFSQLLSNFELQGLNLKDLVALSGAHTIGMAKCSSFRERIYNDTNIDPHFAISMQENCPRKGCDDNFEAFDHVTPNKFDDSYYKNLINKKGLLHSDQELYKGDGSESDRLVRRYSRNPHAFARDFKASMIKMGNIKPLTGIYGEIRTDCSKVNS 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01391 324 CDD secretory_peroxidase 25 322 IPR033905 GO:0004601|GO:0042744
Vifa2g01391 324 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g01391 324 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g01391 324 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g01391 324 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g01391 324 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g01391 324 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g01391 324 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g01391 324 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g01391 324 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Vifa2g01391 324 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g01391 324 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g01391 324 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g01391 324 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g01391 324 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g01391 324 Pfam Peroxidase 50 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g01391 324 Gene3D - 29 320 - -
Vifa2g01391 324 SUPERFAMILY Heme-dependent peroxidases 26 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa2g01391 324 ProSiteProfiles Plant heme peroxidase family profile. 25 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g01391 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Vifa2g01391 324 FunFam Peroxidase 166 302 - -
Vifa2g01391 324 Gene3D Peroxidase, domain 2 166 302 - -
Vifa2g01391 324 PANTHER PEROXIDASE 72-RELATED 23 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01391 Vifa-Chr2 379724223 379725374 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01391 23 323 Peroxidase AT5G05340 52.145 5.75e-113 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01391 K00430 - gmx:100816580 442.58