Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01384 ATGGACAAGGGCAACGTTGTTTTGTTGGATTTCTGGCCAAGCGTGTATGCAATGAGAGTAAAAATCGCATTAGAGGAGAAGGGAGTCTCATATGAATGTAGACAAGAAGACTTTCAAGCTAAAAGCTCTCTACTTTTAGAGATGAACCCGGTTTACAAAAAGATCCCGGTCTTGATTCATAATGGAAAACCCATATGTGAATCACTCAACATTGTTGAGTATATTGATGAGGTTTGGAATCACAAACCTTCTCTTTTGCCCTCTGATCCTTACAACCGATCCCAAGCCAAGTTTTGGGGAGATTACATCGACAAACATGTATACAACATTAGAAGGAAGATATGGTTAGGAAAGGGTAAAGAACAAGAAGAAAGTAAAAAGAAGTTTATAGAATGTTTGAAGACTTTAGAAGATGAGCTTGGAGAGAAGCCATATTATGGTGGAGATGACTTTGGGTACGTTGATTTGGCTCTTATTCCTTTCACATGTTGGTTTTACACGTATGAGACTTATGGGAAACTAAATATGGAAGAAGAGTGTCCTAAGCTTGTGGTTTGGGGCAAAAGGTGTATGGAAAAAGAGAGTGTGGCAAAGTCACTCCCTCACCCTCACAAAATCTATGGTTTTGCAAGTACAAGGATTTAA 645 0.3891 MDKGNVVLLDFWPSVYAMRVKIALEEKGVSYECRQEDFQAKSSLLLEMNPVYKKIPVLIHNGKPICESLNIVEYIDEVWNHKPSLLPSDPYNRSQAKFWGDYIDKHVYNIRRKIWLGKGKEQEESKKKFIECLKTLEDELGEKPYYGGDDFGYVDLALIPFTCWFYTYETYGKLNMEEECPKLVVWGKRCMEKESVAKSLPHPHKIYGFASTRI 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01384 214 SFLD Glutathione Transferase (cytosolic) 2 212 IPR040079 -
Vifa2g01384 214 CDD GST_C_Tau 90 213 IPR045074 GO:0004364|GO:0006749
Vifa2g01384 214 Pfam Glutathione S-transferase, C-terminal domain 123 186 - -
Vifa2g01384 214 SFLD Main.3: Omega- and Tau-like 2 212 IPR045073 -
Vifa2g01384 214 Gene3D Glutaredoxin 3 88 - -
Vifa2g01384 214 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 207 IPR045073 -
Vifa2g01384 214 SUPERFAMILY GST C-terminal domain-like 77 212 IPR036282 -
Vifa2g01384 214 Pfam Glutathione S-transferase, N-terminal domain 7 77 IPR004045 -
Vifa2g01384 214 FunFam Glutathione S-transferase U20 89 213 - -
Vifa2g01384 214 CDD GST_N_Tau 6 79 - -
Vifa2g01384 214 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 209 IPR010987 -
Vifa2g01384 214 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Vifa2g01384 214 Gene3D - 89 214 - -
Vifa2g01384 214 FunFam Tau class glutathione S-transferase 1 88 - -
Vifa2g01384 214 SUPERFAMILY Thioredoxin-like 5 108 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01384 Vifa-Chr2 378128844 378129600 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01384 4 211 Glutathione S-transferase Gene Family AT1G78380 61.538 8.18e-99 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01384 K00799 - gmx:100527221 355.14