Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01383 ATGGAAAATAACGGCGTTGTTTTGTTGGATTTTTGGCCAAGCTCATACGGAATGAGAGTGAAAATCGCGTTGGAGGAGAAGAGAGTCTCATATGACTGCAGACAAGAAGATTTTCAATCTAAAAGCTCTCTTCTTTTAGAGATGAACCCGGTTTACGAAATGATCCCGGTCTTGGTTCATAATGGAAAACCCATATGTGAATCACTCAACATTGTTGAGTATATTGATGAGGCTTGGAATCACAAACCTTCTCTTTTGCCCTCTGATCCTTACAACCGATCCCAAGCCAAGTTTTGGGGAGACTACATTGACAAACATATATACAACATTGGAAAGAAGGTATGGACAGGAAAGGGTAAAGAACAAGAAGAGGGTAAAAAGAAGTTTATAGAATGTTTGAAGACTTTAGAAGGTGAGCTTGGAGAGAAGCCATATTTTGGTGGAGATGACTTTGGATATGTTGATGTGGCTCTTATTCCTTTCACAAGTTGGTTTTACACATATGAGACTTATGGGAAACTAAGCATAGAGGAAGAGTGTCCTAAGCTTGTGGCTTGGGCCAAAAGGTGTATGGAAAAAGAGAGTGTGGCAAAGTCACTCCCTCACCCTCACAAAATTTATGGTTTCGCAATGCAATATAAACAGACTCATGGACTTGTTTAG 663 0.3997 MENNGVVLLDFWPSSYGMRVKIALEEKRVSYDCRQEDFQSKSSLLLEMNPVYEMIPVLVHNGKPICESLNIVEYIDEAWNHKPSLLPSDPYNRSQAKFWGDYIDKHIYNIGKKVWTGKGKEQEEGKKKFIECLKTLEGELGEKPYFGGDDFGYVDVALIPFTSWFYTYETYGKLSIEEECPKLVAWAKRCMEKESVAKSLPHPHKIYGFAMQYKQTHGLV 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01383 220 Pfam Glutathione S-transferase, N-terminal domain 8 77 IPR004045 -
Vifa2g01383 220 FunFam Tau class glutathione S-transferase 1 88 - -
Vifa2g01383 220 SUPERFAMILY Thioredoxin-like 6 108 IPR036249 -
Vifa2g01383 220 CDD GST_C_Tau 90 213 IPR045074 GO:0004364|GO:0006749
Vifa2g01383 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 207 IPR045073 -
Vifa2g01383 220 FunFam Glutathione S-transferase U20 89 220 - -
Vifa2g01383 220 Pfam Glutathione S-transferase, C-terminal domain 123 189 - -
Vifa2g01383 220 SFLD Main (cytGST) 2 216 - -
Vifa2g01383 220 CDD GST_N_Tau 6 79 - -
Vifa2g01383 220 Gene3D Glutaredoxin 2 88 - -
Vifa2g01383 220 Gene3D - 89 220 - -
Vifa2g01383 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Vifa2g01383 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 209 IPR010987 -
Vifa2g01383 220 SUPERFAMILY GST C-terminal domain-like 77 216 IPR036282 -
Vifa2g01383 220 SFLD Main.3: Omega- and Tau-like 2 216 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01383 Vifa-Chr2 377849136 377849914 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01383 4 217 Glutathione S-transferase Gene Family AT1G78370 60.280 1.15e-100 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01383 K00799 - gmx:100527221 375.941