Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01378 ATGAGTTACATTCGTAGTTTCCTTTTGTTACACCCTCAATCCTTTTGGCCTCTTTTCCTTGTTATGTTTTTATGCTTTATCACTATTAAAATGCTAAGATATCATTTGATGAGTGTGAAGCCTGTAATACCAAAATTGCCCCCAGGTCCTAAACCATGGCCTATAGTTGGTAACCTTCCTGAAATGCTTGCAAACAAATCTCCAACTAGGTGGATACACAAAATAATGGAAGAAATGAACACTGATATAGCATGTATCCGTCTAGGAAATGTCCATGTTATCCCTATTACTTGTCCCATCATTGCTCTTGAGTTCTTAAGAAAACATGATGCTGATTTTGCATCAAGACCAATATCCATGGCCACTGATATCATCAGCAATGGTTTCTTGACAACAGCTGTTACACCCTTTGGAGAACAATGGAAGAAAATGAAGAAAATATTCGTCAACGAACTATTCTCCCCCCACAAACATCAATGGCTCACAAACAAAAGGAATGAAGAAGCTGATAACATGATGTTCTATGTCTACAACAAATGCAAAAATGTGAATGATAATGGTCTTGTGAATGTTAGGATCATCACGCGACATTATTGTTGTAATTTGATGAGGAAAATAGTTTTTAATACAAGGAATTTCGGAGAAGGTAAGAATGATGGAGGTCCTGGTTTGGAGGAAGTTGAACATGTAGATGCTATTTTCACACTGCTTAGGTATGTTTTTGCTTTTTGTGTTTCTGATTATATGCCATCGTTGAGAGGACTTGACATTGATGGACATGAGAGAAAGGTGAAGGATGCTATGAGTATTGTGAAAAAGTATAATGATCCAATCATTGAAAGGAGAATTGAAAAATGGAAAGATGGATCAATGGCTAGTGCTGATGCAGAAGACATACTTGATATTCTAATCTCTCTCAAAGATGCCAACAACGAACCATTATTGACAACGAAAGAAATCAAGGCTCAAGCTCTAGAACTCGTGCTGGGAGGAGTGGACAATCCATCACATTCAGCCGAATTTGCAATATCAGAAATGATAAATCAGCCCGAGTTACTTCAACGAGCGACTGAAGAATTGGACAATATTGTAGGAAAGCAAAGACTAGTCCAAGAATCGGATATTCCAAATCTCAACTACGTGAAAGCTTGTGCGAAAGAAGCTATTCGTCTTCATCCCATCACAATTTTTAATCCTCCCCATGTATCAATGGAGAACATAGTGGTTGGTAATTACATGATCCCGAAAGGTAGCCATGTGATTCTAAGCAAACAAGGACTCGGACGAAACCCAAAAGTTTGGAATGAACCTTACAAATTTAAACCAGAACGCCATCTGAAAAATGATGGATCTATGGTAGTTTTGGCGGAACCAGATTTGAAGTTGATATCGTTTAGTACAGGAAGACGTGCTTGTCCTGGAATTGTGATCGGAACCACAATGACTGTGATGTTATTGGGTAGATTGCTCCATGGCTTCAACTGGAGTGAAGCTCCTAATGTATCAACCATAGATCTTCTCAAGTATTCCAATGGTGATAGATACATTGGAGGGCCACTTGTAGCAATAGCAAAGCCAAGATTGGCAGCAGAATTGTATCAACCATAA 1608 0.3856 MSYIRSFLLLHPQSFWPLFLVMFLCFITIKMLRYHLMSVKPVIPKLPPGPKPWPIVGNLPEMLANKSPTRWIHKIMEEMNTDIACIRLGNVHVIPITCPIIALEFLRKHDADFASRPISMATDIISNGFLTTAVTPFGEQWKKMKKIFVNELFSPHKHQWLTNKRNEEADNMMFYVYNKCKNVNDNGLVNVRIITRHYCCNLMRKIVFNTRNFGEGKNDGGPGLEEVEHVDAIFTLLRYVFAFCVSDYMPSLRGLDIDGHERKVKDAMSIVKKYNDPIIERRIEKWKDGSMASADAEDILDILISLKDANNEPLLTTKEIKAQALELVLGGVDNPSHSAEFAISEMINQPELLQRATEELDNIVGKQRLVQESDIPNLNYVKACAKEAIRLHPITIFNPPHVSMENIVVGNYMIPKGSHVILSKQGLGRNPKVWNEPYKFKPERHLKNDGSMVVLAEPDLKLISFSTGRRACPGIVIGTTMTVMLLGRLLHGFNWSEAPNVSTIDLLKYSNGDRYIGGPLVAIAKPRLAAELYQP 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01378 535 Gene3D Cytochrome P450 39 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01378 535 Pfam Cytochrome P450 47 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01378 535 SUPERFAMILY Cytochrome P450 47 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01378 535 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01378 535 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01378 535 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01378 535 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01378 535 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01378 535 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01378 535 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01378 535 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 19 533 - -
Vifa2g01378 535 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
Vifa2g01378 535 FunFam Cytochrome P450 9 40 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01378 Vifa-Chr2 375791655 375793352 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01378 24 533 Cytochrome P450 AT2G22330 50.489 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01378 - K14984 gmx:100787378 740.339