Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01375 ATGCTTGCAAGCAAATCTCCAAGTGAGTGGATACACAAAACAATGGAAGAGTTCAACACTGAAATAGCATGTATCCGTCTAGGAAATGTCCATGTTATCCCTGTTAATTGTCCCACCATTGCTTGTGAATTCTTGAAAAAACATGATGCTGATTTTGCATCAAGACCAAAAACCATGGCCACTGATATCATCTCCAATGGCTACTTGACTTCAGTCCTTGCACCCTCTGGCCAACAATGGAAAAAGATGAGGAAAATTGTTGCAAAGGATTTGCTCTCTCCATTCAGGCATCAATGGCTTCAAGACAAAAGAAACGAAGAAGCCAACAATCTAATGTTTTATGTGTATAATAAATGCAACAACAGTGAACTTGTGAATGTTAGGATTGCAGCACAACATTATAGTGGTAATGTTTTTAGAAAAATATTTTTTAATACAAGGTACTTCGGAAATGGTATGAAAAATGGAGGGCCTGGTGTTGAAGAAATTGAACATGTTGATGCTGCTTTCGAATTGCTTAACCATGTTTACGCTTTCTCTGCTTCTGATTATATCCCATTGTTGAGATTATTTGATTTAGATGGACATAAGGGCAAGGTAAAAAATGCAATGAAGATAATGAATAAGTATCATGATTCTATCATTCAACAGAGAATTAGACAATGGAAAGATGGATCAAAGGATGTTGAAGAAGATTTGTTAGATGTTTTGATTTCATTAAAAGATGTCAATAATAATCCATTATTGACAACGAAGGAAGTCAAGGCTCAAACTATTGAATTAATGATGGCAATGATAGACAATCCATCAAATGTGGTTGAATGGACATTGGCCGAAATGTTAAAACAACCCAATCTATTAGAAAAAGCTATAGAAGAATTGGACAATATAGTTGGAAAAGAAAGACTAGTTCAAGAATCGGATATTCCTAAATTCAAATTCTTGAATGCTTGTGCAAGAGAAACATTCCGCCTCCATCCTATATCTGCTTTCAATCCTCCCCATCTTTCTATGAATGATACAATAGTTAGAAATTTCTTGATACCAAAGGGTAGCCATGTATTGCTTGGAAGAATTGGTCTTGGGAGAAATCCAAAAGTTTGGACCGAACCTTACAAATTTGAACCAGAACGTCATCTCAAGAATGATGGACATGACATATCTTTGACAGAGCCGAGTTTAAAGTTTATATCATTTAGTACAGGAAGACGTGGTTGTCCTGGTGTCAAGCTTGGCACCACAATGACTATCTTTTTATTAGCTAGGTTGCTCCACGGCTTTACTTGGAACATACATCCCAATACATCAAAAATCAATTTTGATGAGCCACTTAAGCTTGTAGCAAAGCCACGATTAAGAATAGATTTGTATAATTTTTGA 1380 0.358 MLASKSPSEWIHKTMEEFNTEIACIRLGNVHVIPVNCPTIACEFLKKHDADFASRPKTMATDIISNGYLTSVLAPSGQQWKKMRKIVAKDLLSPFRHQWLQDKRNEEANNLMFYVYNKCNNSELVNVRIAAQHYSGNVFRKIFFNTRYFGNGMKNGGPGVEEIEHVDAAFELLNHVYAFSASDYIPLLRLFDLDGHKGKVKNAMKIMNKYHDSIIQQRIRQWKDGSKDVEEDLLDVLISLKDVNNNPLLTTKEVKAQTIELMMAMIDNPSNVVEWTLAEMLKQPNLLEKAIEELDNIVGKERLVQESDIPKFKFLNACARETFRLHPISAFNPPHLSMNDTIVRNFLIPKGSHVLLGRIGLGRNPKVWTEPYKFEPERHLKNDGHDISLTEPSLKFISFSTGRRGCPGVKLGTTMTIFLLARLLHGFTWNIHPNTSKINFDEPLKLVAKPRLRIDLYNF 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01375 459 Pfam Cytochrome P450 11 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01375 459 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 399 408 IPR017972 GO:0005506|GO:0016705
Vifa2g01375 459 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 17 450 - -
Vifa2g01375 459 Gene3D Cytochrome P450 1 456 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01375 459 SUPERFAMILY Cytochrome P450 4 450 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01375 459 PRINTS E-class P450 group I signature 406 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01375 459 PRINTS E-class P450 group I signature 316 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01375 459 PRINTS E-class P450 group I signature 357 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01375 459 PRINTS E-class P450 group I signature 40 61 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01375 459 PRINTS E-class P450 group I signature 273 299 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01375 459 PRINTS E-class P450 group I signature 396 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01375 459 PRINTS E-class P450 group I signature 134 152 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01375 Vifa-Chr2 375488267 375489820 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01375 1 457 Cytochrome P450 AT2G22330 50.964 3.44e-177 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01375 - K14984 lja:Lj0g3v0137329.1 662.914