Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01374 ATGGATGAATTAGTGCACACAACACTACTAAAAGAATTGAAAGAGAATAAAACAATAAAAGTTGTGAGGTTGATGAAAAAAATGTCCTATGATATGGCATCCAATATCTTATTTGACATAGATCAGCACACAAGGAATATTTTATTTAGTGATTTCATCACATCATTTAAAGCAATTCACTCTCTTCCAATAAATCTTCCTGGCACCTCATTTTGGAGAGGCCAAAAAGCTAGAGCAAGAATTGTGGAAAAGATACTTCCTATTATGAACAAAAGAAGGGAAGAATTATCAAAAGGAGTTCTAAGTTCTTCCAATGATATGCTTTCATGCCTTCTTGCAGTAAGAGATGAAAATAATAAGCCTCTAGACGATGACATCATTACCGACAATTTTATTTTTTTGTTTGTTGCAAGTCATGACACATCTGCTACTCTTATGACATTGATGATATGGAAGTTATCAAGAGATCAGGAGGTTTATAACAAAGTTTTAGAAGAACAAATGGAAATTTTAAAGCAAAGGAATGGAAGTGAAGAGAGGTTAACATGGGGAGAGATACAAAAGATGAAATACACATGGAGAGTTGCTCAAGAATTGATGAGAATGATCCCTCCTTTTTTTGGTGTATTTAGGAAAGCACTTAAAGATATTAGTTACCAAGGATATGACATACCAAAAGGGTGGCAGGTATATTGTGCATCAAGTGGAACACATATGGATAAAGATATATTCGAGAATCCACACAAGTTTGATCCATCTCGTTTTGAAAATCAAACCAAGTCAATTCCACCATTTTCATACCTTCCATTTGGTGCAGGGTGTCATTATTGCATAGGAAATGAGTTTGCTAGGGTTGAGACATTAACTACCATTCACAATTTTGTGAACTTGTACGAATGGTCTCAATTGAATCCAGAGGAAACTATTACTCGTCAACCAATGCCATATCCATCTTTGGGCCTCCCAATTGAGATCAAACCAAGATGTAATATGTCTTAA 999 0.3483 MDELVHTTLLKELKENKTIKVVRLMKKMSYDMASNILFDIDQHTRNILFSDFITSFKAIHSLPINLPGTSFWRGQKARARIVEKILPIMNKRREELSKGVLSSSNDMLSCLLAVRDENNKPLDDDIITDNFIFLFVASHDTSATLMTLMIWKLSRDQEVYNKVLEEQMEILKQRNGSEERLTWGEIQKMKYTWRVAQELMRMIPPFFGVFRKALKDISYQGYDIPKGWQVYCASSGTHMDKDIFENPHKFDPSRFENQTKSIPPFSYLPFGAGCHYCIGNEFARVETLTTIHNFVNLYEWSQLNPEETITRQPMPYPSLGLPIEIKPRCNMS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01374 332 PANTHER CYTOCHROME P450 26 1 317 - -
Vifa2g01374 332 SUPERFAMILY Cytochrome P450 7 328 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01374 332 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 270 279 IPR017972 GO:0005506|GO:0016705
Vifa2g01374 332 Pfam Cytochrome P450 7 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01374 332 PRINTS B-class P450 signature 239 254 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01374 332 PRINTS B-class P450 signature 194 205 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01374 332 PRINTS B-class P450 signature 211 238 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01374 332 PRINTS B-class P450 signature 277 288 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01374 332 PRINTS B-class P450 signature 268 277 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01374 332 PRINTS P450 superfamily signature 268 277 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01374 332 PRINTS P450 superfamily signature 277 288 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01374 332 PRINTS P450 superfamily signature 137 154 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01374 332 PRINTS P450 superfamily signature 194 205 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01374 332 Coils Coil 161 181 - -
Vifa2g01374 332 Gene3D Cytochrome P450 1 328 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01374 Vifa-Chr2 375132432 375133661 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01374 15 332 Cytochrome P450 AT4G19230 35.494 4.03e-54 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01374 - - gmx:100790209 561.607