LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa2g01371	ATGATGGGATACACTCCAGCTTTCCTCTCGTTACTCCCTCTGTGCTTTTGGTCTTTTTCACTTGTTATGTTTTTTGTCTTTATGATTATTAAATCCTTCAGTTGTCACTTGATAAATATGAATCCAAATATACCAAAATTGCCACCAGGTCCTAAACCATGGCCTATAGTTGGAAATCTTCCTGAATTGCTTGCAAGCAAATCTCCAACTGAATGGATACACAAAACCATGGAAGAATTGAACACTGAAATAACATGTATTCACCTAGGAAATGTCCATGTTATCCCTGTTACGTGTCCAACCATTGCTCGCGAATTCTTGAGAAAATATGATGCTGATTTTTCGTCAAGACCAACAACCATGGCAACTGATATAATCTCCAATGGACACTTAACCACAATATTTGTTCCCTTTGGCCAACAATGGAAAAAGATGAGGAAAATTATTGCAACGGATTTGCTCTCTCCAATCAGACATCAATGGCTTGAAGGCAAAAGAAACGAAGAAGCCGATAATCTTATGTTTTACGTGTACAACAAATGCAAGGAAGGAGATCTTGTGAATGTTAGAATTGCAACACAACATTATTGTGGAAATGTGTATAGAAAAATGTTTTTTAATACGAGATACTTTGGAAATGGAACGAAAGATGGAGGGCCTGGTGTTGAAGAAAAAGAACACGTTGATGCTGTTTTTGTTTTGCTTGATCATATTTATGCTTTCTCTGCGTCTGATTATATCCCATGGTTGAGGTTACTTGATTTAGATGGACATAAGGACAAGGTAAAAAATGCAATGAAGATAATGAACAAATATCATGATTCTCTCATTGAAGAGAGGATCAAACAATGGAATGATGGATCAAAGAATGTTGAAGAGGACTTGCTAGATGTTTTGATTTCATTAAAAGATGTCAATAATAATCCATTATTGACAACGAAGGAAATCAAGGCTCAAACTATTGAATTAATGATGGCAATGATAGACAATCCATCAAACGCAGTTGAATGGACATTGGCTGAAATGTTAAAACAACCCGATCTACTAGAAAAAGCTATAGAAGAATTGGACAATATAGTTGGAAAAGAAAGACTAGTCCAAGAATCGGATATTCCTAAACTCAAATTCTTGAATGCTTGTGCAAGAGAAGCATTCCGCCTCCATCCTGTAACTGCTTTCACTCCTCCCCATCTTTCTATGAATGATACAATAGTTGGAAATTTCTTGATACCAAAGGGTAGTCATGTATTGCTTGGAAGAATTGGTCTTGGGAGAAATCCAAAAGTTTGGACCGAACCTTACAAATTTCAACCAGAACGTCATCTCAAGAATGATGGACATGACATATCTTTGACAGAGTCGGATTTAAAATTTATATCTTTTAGTACAGGAAGACGTGGTTGTCCCGGTGTCAAGCTTGGCACCATAATGACTATCCTTTTATTAGCTAGGTTACTCCACGGCTTCATTTGGAATATACATCCCAATACATCAAAAATCAATTTTGATGAGCCACTTAAGCTTGTAGCAAAGCCACGATTAAGAATAGATTTGTATAATTTTTGA	1566	0.3627	MMGYTPAFLSLLPLCFWSFSLVMFFVFMIIKSFSCHLINMNPNIPKLPPGPKPWPIVGNLPELLASKSPTEWIHKTMEELNTEITCIHLGNVHVIPVTCPTIAREFLRKYDADFSSRPTTMATDIISNGHLTTIFVPFGQQWKKMRKIIATDLLSPIRHQWLEGKRNEEADNLMFYVYNKCKEGDLVNVRIATQHYCGNVYRKMFFNTRYFGNGTKDGGPGVEEKEHVDAVFVLLDHIYAFSASDYIPWLRLLDLDGHKDKVKNAMKIMNKYHDSLIEERIKQWNDGSKNVEEDLLDVLISLKDVNNNPLLTTKEIKAQTIELMMAMIDNPSNAVEWTLAEMLKQPDLLEKAIEELDNIVGKERLVQESDIPKLKFLNACAREAFRLHPVTAFTPPHLSMNDTIVGNFLIPKGSHVLLGRIGLGRNPKVWTEPYKFQPERHLKNDGHDISLTESDLKFISFSTGRRGCPGVKLGTIMTILLLARLLHGFIWNIHPNTSKINFDEPLKLVAKPRLRIDLYNF	521

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa2g01371	521	FunFam	Cytochrome P450 9	40	517	-	-
	Vifa2g01371	521	SUPERFAMILY	Cytochrome P450	48	512	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vifa2g01371	521	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	461	470	IPR017972	GO:0005506\|GO:0016705
	Vifa2g01371	521	PANTHER	CYTOCHROME P450 703A2-RELATED-RELATED	18	512	-	-
	Vifa2g01371	521	Gene3D	Cytochrome P450	37	518	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vifa2g01371	521	PRINTS	E-class P450 group I signature	458	468	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vifa2g01371	521	PRINTS	E-class P450 group I signature	468	491	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vifa2g01371	521	PRINTS	E-class P450 group I signature	378	396	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vifa2g01371	521	PRINTS	E-class P450 group I signature	419	443	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vifa2g01371	521	PRINTS	E-class P450 group I signature	335	361	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vifa2g01371	Vifa-Chr2	374677232	374678971	Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vifa2g01371	20	519	Cytochrome P450	AT4G39950	51.569	0.0	543

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vifa2g01371	-		K12153	gmx:100787378	699.508

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