Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01371 ATGATGGGATACACTCCAGCTTTCCTCTCGTTACTCCCTCTGTGCTTTTGGTCTTTTTCACTTGTTATGTTTTTTGTCTTTATGATTATTAAATCCTTCAGTTGTCACTTGATAAATATGAATCCAAATATACCAAAATTGCCACCAGGTCCTAAACCATGGCCTATAGTTGGAAATCTTCCTGAATTGCTTGCAAGCAAATCTCCAACTGAATGGATACACAAAACCATGGAAGAATTGAACACTGAAATAACATGTATTCACCTAGGAAATGTCCATGTTATCCCTGTTACGTGTCCAACCATTGCTCGCGAATTCTTGAGAAAATATGATGCTGATTTTTCGTCAAGACCAACAACCATGGCAACTGATATAATCTCCAATGGACACTTAACCACAATATTTGTTCCCTTTGGCCAACAATGGAAAAAGATGAGGAAAATTATTGCAACGGATTTGCTCTCTCCAATCAGACATCAATGGCTTGAAGGCAAAAGAAACGAAGAAGCCGATAATCTTATGTTTTACGTGTACAACAAATGCAAGGAAGGAGATCTTGTGAATGTTAGAATTGCAACACAACATTATTGTGGAAATGTGTATAGAAAAATGTTTTTTAATACGAGATACTTTGGAAATGGAACGAAAGATGGAGGGCCTGGTGTTGAAGAAAAAGAACACGTTGATGCTGTTTTTGTTTTGCTTGATCATATTTATGCTTTCTCTGCGTCTGATTATATCCCATGGTTGAGGTTACTTGATTTAGATGGACATAAGGACAAGGTAAAAAATGCAATGAAGATAATGAACAAATATCATGATTCTCTCATTGAAGAGAGGATCAAACAATGGAATGATGGATCAAAGAATGTTGAAGAGGACTTGCTAGATGTTTTGATTTCATTAAAAGATGTCAATAATAATCCATTATTGACAACGAAGGAAATCAAGGCTCAAACTATTGAATTAATGATGGCAATGATAGACAATCCATCAAACGCAGTTGAATGGACATTGGCTGAAATGTTAAAACAACCCGATCTACTAGAAAAAGCTATAGAAGAATTGGACAATATAGTTGGAAAAGAAAGACTAGTCCAAGAATCGGATATTCCTAAACTCAAATTCTTGAATGCTTGTGCAAGAGAAGCATTCCGCCTCCATCCTGTAACTGCTTTCACTCCTCCCCATCTTTCTATGAATGATACAATAGTTGGAAATTTCTTGATACCAAAGGGTAGTCATGTATTGCTTGGAAGAATTGGTCTTGGGAGAAATCCAAAAGTTTGGACCGAACCTTACAAATTTCAACCAGAACGTCATCTCAAGAATGATGGACATGACATATCTTTGACAGAGTCGGATTTAAAATTTATATCTTTTAGTACAGGAAGACGTGGTTGTCCCGGTGTCAAGCTTGGCACCATAATGACTATCCTTTTATTAGCTAGGTTACTCCACGGCTTCATTTGGAATATACATCCCAATACATCAAAAATCAATTTTGATGAGCCACTTAAGCTTGTAGCAAAGCCACGATTAAGAATAGATTTGTATAATTTTTGA 1566 0.3627 MMGYTPAFLSLLPLCFWSFSLVMFFVFMIIKSFSCHLINMNPNIPKLPPGPKPWPIVGNLPELLASKSPTEWIHKTMEELNTEITCIHLGNVHVIPVTCPTIAREFLRKYDADFSSRPTTMATDIISNGHLTTIFVPFGQQWKKMRKIIATDLLSPIRHQWLEGKRNEEADNLMFYVYNKCKEGDLVNVRIATQHYCGNVYRKMFFNTRYFGNGTKDGGPGVEEKEHVDAVFVLLDHIYAFSASDYIPWLRLLDLDGHKDKVKNAMKIMNKYHDSLIEERIKQWNDGSKNVEEDLLDVLISLKDVNNNPLLTTKEIKAQTIELMMAMIDNPSNAVEWTLAEMLKQPDLLEKAIEELDNIVGKERLVQESDIPKLKFLNACAREAFRLHPVTAFTPPHLSMNDTIVGNFLIPKGSHVLLGRIGLGRNPKVWTEPYKFQPERHLKNDGHDISLTESDLKFISFSTGRRGCPGVKLGTIMTILLLARLLHGFIWNIHPNTSKINFDEPLKLVAKPRLRIDLYNF 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01371 521 FunFam Cytochrome P450 9 40 517 - -
Vifa2g01371 521 SUPERFAMILY Cytochrome P450 48 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01371 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Vifa2g01371 521 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 18 512 - -
Vifa2g01371 521 Gene3D Cytochrome P450 37 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01371 521 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01371 521 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01371 521 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01371 521 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01371 521 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01371 521 PRINTS E-class P450 group I signature 102 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g01371 521 Pfam Cytochrome P450 48 512 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01371 Vifa-Chr2 374677232 374678971 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01371 20 519 Cytochrome P450 AT4G39950 51.569 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01371 - K12153 gmx:100787378 699.508