Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01366 ATGCCTGAATTAGAACAAAGCAAAAAGATGGTGAATCAAGAGAGTTTTCTCAAACAAAGGATTTCGAAGGCTAAAGAGCAAGTTAAGAAGCAAAGGAAAGATAACAAAGAGAAAGAAACAACCATGCTGATGTTTCAATGTCTTAATGCCGGGAAGATCGTGCAGAACGATATGTCCGTGGGTGATTTGAATGATCTTGCATGCATGATTTATCAGAATCTGAAGGAGATTGGTAAAAGGATGGAACCAGGTGAGAACAAAATTAATTTTCATCAAAGTCAAAGTGAGAGTCAAATTATGGCGGCTCAAAGCCATGCCCAACTCCAAATGGCACCACCGTTACCGCCACCGCCGCCGCCGCCAACCACATTTAATAATGATGAAATGGCAATGATGGATCATGGCCATGTTGGGATGGCCTGGAACAATAATGACATCATTCAAAAGCAGTTGTTTATGGACATGATGAATGGTGGTGGAAATGGAACAATTACATTTGGTTATGATGCCAATCTTCAGAATGGGTTTTGGCCTAATCGACTATTTTGA 549 0.4062 MPELEQSKKMVNQESFLKQRISKAKEQVKKQRKDNKEKETTMLMFQCLNAGKIVQNDMSVGDLNDLACMIYQNLKEIGKRMEPGENKINFHQSQSESQIMAAQSHAQLQMAPPLPPPPPPPTTFNNDEMAMMDHGHVGMAWNNNDIIQKQLFMDMMNGGGNGTITFGYDANLQNGFWPNRLF 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01366 182 Coils Coil 14 41 - -
Vifa2g01366 182 MobiDBLite consensus disorder prediction 1 37 - -
Vifa2g01366 182 MobiDBLite consensus disorder prediction 19 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01366 Vifa-Chr2 369326273 369326821 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01366 1 124 Type I MADS-box Gene Family AT5G48670 42.742 6.57e-23 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01366 - - psat:127080453 199.134