Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01346 ATGATGAAAATCCACATCATATGGTTCTTTTCCATTCAAATTTTGCTGCATGTTTCATCCTCAAGCAGTGGAAAAGTTCCAGCTTTAATAGTTTTTGGAGACTCATCTGTTGATTCTGGTAACAACAATTTCATTCCAACAATAGCAAGAAGCAACTTTGAACCTTATGGTAGAGATTTTCCTAATGGAAATCCAACTGGTAGATTCTCAAATGGTAGATTAGCTCCTGATTTCATCTCCGAGGCGTTTGGACTTAAGCCAATTGTTCCTGCTTATTTGGATCATTCTTATGACATTACTGATTTTGCTACTGGTGTTTGTTTTGCCTCTGCTGGTACTGGATTTGATAACATTACTGCAAGTGTTGCCGATGTGATACCTTTATGGAAAGAAGTTGAGTATTACAAAGAATATCAAAACAGATTAAGAGCAAAATTTGGAAACAAGAAAGCTAATGAAATAATAAACGAGTCTTTATATTTGATTAGCATAGGAACAAATGATTTTCTTGAAAATTATTACCAACGTCTTGAAAGGAGGTTGCAATTTAGTGTTCAAGAATATGAGGATTTTTTAATTGGACTTGCTGAAAATTTTCTAAGGGAAATTTATGACCTTGGAGCAAGGAAAATTTCTATGACAGGGTTGATTCCTATGGGGTGTCTGCCACTAGAGAGGGCAATAAATATTTTGGGCCATCATGGTTGTAAGGATTTATACAATGATGTTGCTTTGGACTTTAATGCAAAATTGGAATTCTTAGTGGCTAAGTTAAACAAGGAGCTCTATGGACTTCAATTGGTATGTACAAATGCTTATGATTTGGTCATGCAAATTGTTACAGAACCTTCTCAATTTGGTTTTGAAGATGCAAGAGTGGGATGTTGTGGAACAGGTAGATTTGAGATGGGTTTCTTGTGTGATCCAAAAAGTCCACTTACATGCACAGATGCAAATAAATATGTATTTTGGGATGCTTTTCACCCCTCAGAAAGAACAAGCCAGATAGTAGCAAATTATTTAATGGAAAAGTATCTTGGCGAGTTTCTTTGA 1053 0.3533 MMKIHIIWFFSIQILLHVSSSSSGKVPALIVFGDSSVDSGNNNFIPTIARSNFEPYGRDFPNGNPTGRFSNGRLAPDFISEAFGLKPIVPAYLDHSYDITDFATGVCFASAGTGFDNITASVADVIPLWKEVEYYKEYQNRLRAKFGNKKANEIINESLYLISIGTNDFLENYYQRLERRLQFSVQEYEDFLIGLAENFLREIYDLGARKISMTGLIPMGCLPLERAINILGHHGCKDLYNDVALDFNAKLEFLVAKLNKELYGLQLVCTNAYDLVMQIVTEPSQFGFEDARVGCCGTGRFEMGFLCDPKSPLTCTDANKYVFWDAFHPSERTSQIVANYLMEKYLGEFL 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01346 350 PANTHER GDSL ESTERASE/LIPASE EXL3 13 341 - -
Vifa2g01346 350 FunFam GDSL esterase/lipase APG 18 346 - -
Vifa2g01346 350 CDD SGNH_plant_lipase_like 27 345 IPR035669 -
Vifa2g01346 350 Gene3D SGNH hydrolase 16 345 IPR036514 -
Vifa2g01346 350 Coils Coil 167 187 - -
Vifa2g01346 350 SUPERFAMILY SGNH hydrolase 29 345 - -
Vifa2g01346 350 Pfam GDSL-like Lipase/Acylhydrolase 30 341 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01346 Vifa-Chr2 365120576 365122532 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01346 19 343 Pollen Coat Proteome AT1G75910 34.242 1.05e-64 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01346 - - gmx:100778745 536.184