Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01341 ATGGAATTCAATAAGTTCAGAATTAGAAGCTATGAAGGTCAATCTGATAGAGCTCAAGTTGAAATTCTAGAGAGAAAATGTGAAGTAGGACCTTCAGAAAGTGTGTTTCTCTTCACAGACACTATGGGTGACCCTATTTGTAGGATTCGAAACAGTCCCATGTACATGATGCTGGTGGCTGAATTGGACAATGAATTGGTTGGTGTCATTCAAGGCTCAATAAAAGTTGTAACAGTTCAAGGACATCCACCAAAAGATTTGGCAAAAGTAGGGTATGTCTTAGGCTTAAGGGTATCAAGAAATCATAGAAGAAAAGGAATTGGTTCAAGCCTAGTAACAACATTAGAAGAATGGTTCATTTCAAATGATGTGGACTATGCATACATGGCAACAGAGAAAGAAAATCATGCTTCAACAAATCTCTTCATAAACAAATTTCACTACACAAAATTTAGAACACCATCTATTCTTGTTAACCCTGTGAACCATCATTCATTTAAAATGTCATCCAACATTGAAATATCAAGGTTGAAAATTGAACAAGCTGAGTCACTCTATAGAAGATTCATGGGGTCCACAGAGTTTTTTCCTAATGATATTGGAAATATATTAAAAAATAAGTTGAGCTTAGGGACATGGATGGCATATTTTAAAGATGATATTAATATTGGGCCTAATGGACAAATACCAAAAAGTTGGGCTATGCTTAGTGTATGGAATAGTGGAAAGCTAGTGAGAGCTTTGTGTCAATTTGTGCACAATATGGCTAAAGAGAATAAAGATGACAAGGTTAAGATTATTGTGACTGAAGTTGGAGGAAGAGATGAACTCAATCATCATATTCCACATTGGAAACTACTTTCTTGCCCTGAGGATTTGTGGTGTATAAAGGCATTGAAAAATGAAGGACTTTCAATCAATACATTTCATGAATTGACCAAAACATCACCAACAAGAGCTCTTTTTGTAGACCCAAGAGAGGTTTAA 987 0.3546 MEFNKFRIRSYEGQSDRAQVEILERKCEVGPSESVFLFTDTMGDPICRIRNSPMYMMLVAELDNELVGVIQGSIKVVTVQGHPPKDLAKVGYVLGLRVSRNHRRKGIGSSLVTTLEEWFISNDVDYAYMATEKENHASTNLFINKFHYTKFRTPSILVNPVNHHSFKMSSNIEISRLKIEQAESLYRRFMGSTEFFPNDIGNILKNKLSLGTWMAYFKDDINIGPNGQIPKSWAMLSVWNSGKLVRALCQFVHNMAKENKDDKVKIIVTEVGGRDELNHHIPHWKLLSCPEDLWCIKALKNEGLSINTFHELTKTSPTRALFVDPREV 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01341 328 Gene3D - 22 153 - -
Vifa2g01341 328 CDD NAT_SF 57 128 - -
Vifa2g01341 328 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 219 IPR000182 GO:0016747
Vifa2g01341 328 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 45 142 IPR016181 -
Vifa2g01341 328 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 243 - -
Vifa2g01341 328 Pfam Acetyltransferase (GNAT) family 48 142 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01341 Vifa-Chr2 362852435 362854019 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vifa2g01341 Acetyltransf_1 6.5e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01341 - - psat:127084517 485.337