Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01340 ATGGAATTCAATAAGTTCAGAATTAGAAGCTATGAAGGTCAATCTGATAGAGCTCAAGTTGAAATTCTAGAGAGAAAATGTGAAGTAGGACCTTCAGAAAGTGTGTTTCTCTTCACAGACACTATGGGTGACCCTATTTGTAGGATTCGAAACAGTCCCATGTACATGATGCTGGTGGCTGAATTGGACAATGAATTGGTTGGTGTCATTCAAGGCTCAATAAAAGTTGTAACAGTTCAAGGACATCCACCAAAAGATTTGGCAAAAGTAGGGTATGTCTTAGGCTTAAGGGTATCAAGAAATCATAGAAGAAAAGGAATTGGTTCAAGCCTAGTAACAACATTAGAAGAATGGTTCATTTCAAATGATGTGGACTATGCATACATGGCAACAGAGAAAGAAAATCATGCTTCAACAAATCTCTTCATAAACAAATTTCACTACACAAAATTTAGAACACCATCTATTCTTGTTAACCCTGTGAACCATCATTCATTTAAAATGTCATCCAACATTGAAATATCAAGGTTGAAAATTGAACAAGCTGAGTCACTCTATAGAAGATTCATGGGGTCCACAGAGTTTTTTCCTAATGATATTGGAAATATATTAAAAAATAAGTTGAGCTTAGGGACATGGATGGCATATTTTAAAGATGATATTAATATTGGGCCTAATGGACAAATACCAAAAAGTTGGGCTATGCTTAGTGTATGGAATAGTGGGCCATTTTCAGGAAAGCTAGTGAGAGCTTTGTGTCAATTTGTGCACAATATGGCTAAAGAGAATAAAGATGACAAGGTTAAGATTATTGTGACTGAAGTTGGAGGAAGAGATGAACTCAATCATCATATTCCACATTGGAAACTACTTTCTTGCCCTGAGGATTTGTGGTGTATAAAGGCATTGAAAAATGAAGGACTTTCAATCAATACATTTCATGAATTGACCAAAACATCACCAACAAGAGCTCTTTTTGTAGACCCAAGAGAGGTTTAA 999 0.3564 MEFNKFRIRSYEGQSDRAQVEILERKCEVGPSESVFLFTDTMGDPICRIRNSPMYMMLVAELDNELVGVIQGSIKVVTVQGHPPKDLAKVGYVLGLRVSRNHRRKGIGSSLVTTLEEWFISNDVDYAYMATEKENHASTNLFINKFHYTKFRTPSILVNPVNHHSFKMSSNIEISRLKIEQAESLYRRFMGSTEFFPNDIGNILKNKLSLGTWMAYFKDDINIGPNGQIPKSWAMLSVWNSGPFSGKLVRALCQFVHNMAKENKDDKVKIIVTEVGGRDELNHHIPHWKLLSCPEDLWCIKALKNEGLSINTFHELTKTSPTRALFVDPREV 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01340 332 Pfam Acetyltransferase (GNAT) family 48 142 IPR000182 GO:0016747
Vifa2g01340 332 CDD NAT_SF 57 128 - -
Vifa2g01340 332 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 45 142 IPR016181 -
Vifa2g01340 332 Gene3D - 22 153 - -
Vifa2g01340 332 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 219 IPR000182 GO:0016747
Vifa2g01340 332 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01340 Vifa-Chr2 362852435 362854019 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vifa2g01340 Acetyltransf_1 6.7e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01340 - - psat:127084517 640.188