Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01327 ATGGCTGGAAAGCAAGGTGATAGATATTATTCCATTGATGCACCACTTTTGAATGATGAGAAAGTGAATGATTCAAATACTACTAATACTAATACTAAGGATCCAGAGAGCTTCATAATCCATCATGTGGGTAGCGCTTCTGTATTCAAGACATGCTTCAATCTACTCAATGTTATCTCAGGAGTTGGTATTGTTTCAATGCCGTATGCCCTAGCATCAGGAGGATGGTTAAGCATATTTCTTCTGTTTACAATAGCCATAGCATGTTGTTATACAGGCACATTGGTTAAAAAGTGCATGGACATGGATCCTGATATCAGAACCTTTCCAGACATAGGTTTTCTTATTTTAGAAGGAGACAATCTAAACAAACTGATACCAAATGTGGAAATTCACATAGGAGAGTTTACCATTGTAAGGGCTTTGAATTGGACTGGAATTCCTTCTGCGGTTAGTTTGTATGCTTTTTGTTATAGTGCTCATCCGGTTCTTCCTACTCTCTACAACTCTATGAAGACCAAAAGTCAGTTCTCTAGGGTCCTAATTATAAGCTTTTCAACATGCACGTTTGGTTATGCAGCAGCGGCATTTCTAGGTTACTTAATGTTCGGACAAGAAGTTGAATCACAAGTAACTCTAAATCTCCAAACAGGAAAGTTAAGTTCAAGAATAGCAATATACACAAACTTAGTAAATCCAATAGCAAAATATGCATTAATGCTTACACCAGTAGTAAATGCAGTAAAAGCAAAGGTTTCAAGCAACAAAAGGGTCACACATATGATTATTAGTACATCTTTACTAGTAACCTCTCTTGTTATAGCAGTGGCAATTCCTTTATTTGGATACCTTATGTCACTTGTTGGAGCATTGTTAAGTATCTCAGCTTCAACTTTAGTGCCATCCATTTGTTACTTGAAGATTTCAGGAGATTACAAGAGATTTGGAAGATCAATGATTATTAATTATTCTATAATTATAATGGGAGTTGCTATTGCTGTTTTTGGTACCTATACATCTCTTGTGGATATTATTCAAAACTTGTAA 1047 0.3563 MAGKQGDRYYSIDAPLLNDEKVNDSNTTNTNTKDPESFIIHHVGSASVFKTCFNLLNVISGVGIVSMPYALASGGWLSIFLLFTIAIACCYTGTLVKKCMDMDPDIRTFPDIGFLILEGDNLNKLIPNVEIHIGEFTIVRALNWTGIPSAVSLYAFCYSAHPVLPTLYNSMKTKSQFSRVLIISFSTCTFGYAAAAFLGYLMFGQEVESQVTLNLQTGKLSSRIAIYTNLVNPIAKYALMLTPVVNAVKAKVSSNKRVTHMIISTSLLVTSLVIAVAIPLFGYLMSLVGALLSISASTLVPSICYLKISGDYKRFGRSMIINYSIIIMGVAIAVFGTYTSLVDIIQNL 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01327 348 PANTHER AMINO ACID TRANSPORTER 41 117 - -
Vifa2g01327 348 Pfam Transmembrane amino acid transporter protein 45 114 IPR013057 -
Vifa2g01327 348 Pfam Transmembrane amino acid transporter protein 133 340 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01327 Vifa-Chr2 357984273 357986991 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01327 33 345 Amino Acid or Auxin Permease AAAP Family AT3G28960 44.000 1.35e-101 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01327 K15015 - gmx:100784690 456.447