Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01321 ATGGCTTCAGCATTGGAATGTTGGTCCAGACGCGGCAACAACAACAGCAACAACGACGAAGACATGGTAGAACAAGTCCTCATGGAAACCCACCCATCTTCACATTCACAACCCAACCACAAAGACTCTTCCATTATCCACAAGAAGTTCAACAAACTCACTCGCAATGTTTCTGAAGCTATTGCTTCCCTCAAAAACACCCTCAACATCAACCTTAACCTTGATTCTTCCAAACCCGACAACAACAACAACAACAACAACAACAGTTCTCGTACTAGCAACAATCTCGTTTGGGGAACTGTTGTAAGAAACTTGACTCAGCTTTACCCTGGTAGCCAGCTTCCTGAGAAGCTCATGTCCAACATTCGTAAACACTATGATTCCTTGCCTCCTAGTTATTCTCAGGCGGGATTTGATGTTAAAGATGTGTTTCTTCACATCAAGTTAATGGAGCAAGCGTTGGAAGATTCACAGGCTGCGATTTTGATTGATGAGGAGTGTGATGATGAGATGCAGCTTCAGGGGTCTTTGTTCAAGTTGACATTTGCTTGCAACTCTCCGATTTCATGGCCTGCAATGTCGAGTGCGTTGGATAGTTCCTCCATTTGCTGCAAGAAGATTCAGATCTTTGAGAAGAAAGGCCTCACCCTTGGAATTGTGCTTTTACTTGTTCTTTCTGGGGTTGGTCAAGATAACTTGGTAAGGACCCGGGTTGAATGTGCTCTTAAGTTTGCCATGAAGAAGCCTAAAGCTAGTGTTGTGAAGCTTCCTTTTGGGCTTTGTGGATGTCAAGAGGAGAATTTCAAGGGGAGAGAGCTTGGAGAGATTGAAGAAGATTGCAGCGGTGTATACTGTGAAAATTCGAGTCAAACGATTCACCTTGAAATGCCCTTGCCTAATTCTTCGTTTCACGTATCGGTAGACGAGTGGCAGACTATTCAGATAGATGAAGATGAGATGCGAAAATGGTTGTTGAACTCGGATAGTCTAGAGTTTTTGGAACAGATTGGACAGAATTCGTATAAAGGTGCCTACATGGGGAAAAAGGTTGGCATTGAGAAGCTTAGAGGGTGTGACAAAGGAAACTTGTACGAGTTTGCGCTCAGGAAAGATCTGCTAGAACTGATGACGTGTGGACATAAAAACATTTTGCAGTTTTGCGGTGTTTGTGTAGATGACAATCACGGGTTATGTGTAGTGACAAAATTCATGGAAGGTGGATCTGTCCATGACTTAATTTCAAAGAACAAGAAGCTTCAGAACAGGGATATTGTAAGAATTGCAGTTGATGTGGCCGAGGGGATCAAGTTTATGAATGATCACGGTGCTGCATATCGAGACCTTAATACTCAGAGGATTCTGTTGGATAAACATGGGAGTGCTTGCTTGGGAGATTTGGGTATAGTCACTGCCTGCAAGAGCAACCAAGAGGCAATGGACTATGAAACCGATGGTTACCGATGGCTAGCTCCCGAGATAATCGCTGGCGACCCTGAGAGTGTCACCGAGACATGGATGAGTAATGTTTATAGTTTCGGGATGGTAATTTGGGAGATGGTATCCGGTGAAGCAGCCTATAATGCATATTCACCTGTGCAGGCAGCAGTAGGCATTGCTGCCTGTGGCCTTAGACCTGAGATCCCAAAGGAATGTCCACATACTCTAAAATCTCTAATGACAAAATGCTGGAACAATACACCTTCAAAACGCCCCGAATTCTCCGAAATTTTAGCGATATTGCTGCGAGCGGCCAAACAACAACAATAG 1767 0.4403 MASALECWSRRGNNNSNNDEDMVEQVLMETHPSSHSQPNHKDSSIIHKKFNKLTRNVSEAIASLKNTLNINLNLDSSKPDNNNNNNNNSSRTSNNLVWGTVVRNLTQLYPGSQLPEKLMSNIRKHYDSLPPSYSQAGFDVKDVFLHIKLMEQALEDSQAAILIDEECDDEMQLQGSLFKLTFACNSPISWPAMSSALDSSSICCKKIQIFEKKGLTLGIVLLLVLSGVGQDNLVRTRVECALKFAMKKPKASVVKLPFGLCGCQEENFKGRELGEIEEDCSGVYCENSSQTIHLEMPLPNSSFHVSVDEWQTIQIDEDEMRKWLLNSDSLEFLEQIGQNSYKGAYMGKKVGIEKLRGCDKGNLYEFALRKDLLELMTCGHKNILQFCGVCVDDNHGLCVVTKFMEGGSVHDLISKNKKLQNRDIVRIAVDVAEGIKFMNDHGAAYRDLNTQRILLDKHGSACLGDLGIVTACKSNQEAMDYETDGYRWLAPEIIAGDPESVTETWMSNVYSFGMVIWEMVSGEAAYNAYSPVQAAVGIAACGLRPEIPKECPHTLKSLMTKCWNNTPSKRPEFSEILAILLRAAKQQQ 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01321 588 SUPERFAMILY Protein kinase-like (PK-like) 303 580 IPR011009 -
Vifa2g01321 588 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 91 583 - -
Vifa2g01321 588 Gene3D Transferase(Phosphotransferase) domain 1 323 586 - -
Vifa2g01321 588 MobiDBLite consensus disorder prediction 75 94 - -
Vifa2g01321 588 Pfam Protein tyrosine and serine/threonine kinase 369 579 IPR001245 GO:0004672|GO:0006468
Vifa2g01321 588 PRINTS Tyrosine kinase catalytic domain signature 507 529 IPR001245 GO:0004672|GO:0006468
Vifa2g01321 588 PRINTS Tyrosine kinase catalytic domain signature 551 573 IPR001245 GO:0004672|GO:0006468
Vifa2g01321 588 PRINTS Tyrosine kinase catalytic domain signature 437 455 IPR001245 GO:0004672|GO:0006468
Vifa2g01321 588 PRINTS Tyrosine kinase catalytic domain signature 401 414 IPR001245 GO:0004672|GO:0006468
Vifa2g01321 588 ProSiteProfiles Protein kinase domain profile. 330 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01321 Vifa-Chr2 356405276 356407718 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01321 313 586 MAP Kinase Kinase Kinase AT2G17700 34.155 7.35e-51 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Vifa2g01321 PK_Tyr_Ser-Thr 1.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01321 - - gmx:100819097 874.774