Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01293 ATGGAAGAAGTCGCAAATAGAAGACTAGATCAATTGACTTCATATGGAATGATCAATAATAAAAAAGTAGCTTGTCAATACTTTGCAAGAGAAGGAAACAAGGGTTTGTGGTATGGAGATAATCCCCTCAATGCAACCACATCTGTTCTAGTAGTTCAAATTATTGTCATGTTCTCTCTTAGTAGACTTACTCATTTCCTGTTAAGCCCTTTTCATCAAACTCTTCTCATTGCACAAATTATGGCTGGTATTATAGCTGGTCCATTAGTGTTAGGTCGACACAATACAAGTTATGAGATGTTATTTCCAGCAGCAAGCATAATGACACTAGCAACATTTGCAGAATTTGGAATGATTATTTATTTCTTTAAGATGGGAGTGCAAATAAATTACAAGCAAATCATGAGGATTCAAAAACATGCAGTAATAATTGGAGTATTAGGGCATATATCTGCTATAGTATTTGGAGTTATAGTCTTAAATATTGTTGAAATGATATCACCTTTAGGATCTGAAAAATATGGTATTCAAGGTTTAATAATTTTTGGGTCATTAACCTCATTTCCAGTTATAAGTAGCTTGTTAAGTGAAATGAACATTCTAAGTTCAGAAATAGGAAGAATGGCATTATCAACAGCAATGGTTAGTGATGCATGTATGTGGATAATTTATGTTATCATACTAACTGGAGTTAGAGTTATGGAAGAAAAATCATTTAAATTTATTCTACAAAAGGCTGTAACAGTTTTTTACTTTGGCTTCTTATATTACTTTTTAAGGCCATTGGTTATATGGATCTCTAACCGCAATCGAAAGGGAAGTGATCCCATGACGCAAAGTCATTTCTTGTTGATAATTTGTATACTTATGTTTATCGGATTCTTCGGACTAATATTGGGACAACCTACTTTCATGACTGCCTTTTGGTTCGGTGTTCTTTTGCCAGATGGTCCTCCTTTAGGTTCTATTTTGGCAGAAAAGCTTGATACCATTGGTTCTACTTTGATCTTACCGGCTTATTGCAGTATTAGTGGTTTAAGGACAAGTGTTCCTAAAATACTAGGCTCAAAAACATGTTACATGGAGGTTGTTATAATTGCAGTTTATGTAGGAAAGTTTGTTGGAACCATTTTACCATCACTTCATTTTCATATTGAATTTTGGGATTCTTTTGCTTTGGCTCTAATCATGTGTTGCAAAGGTCTATTGGATCTCTGTACGTTCAACACTTTATTAAATAGTAAGAAAATAGATGAACTTTCGTTCACTCTAATGATATATACAATGGTTGCGATAACAGGATTTGCAACCCTAATTGTTTATTACATATATGACCCTTCAAGGAGATACAAAACCTATATGAGAAAATCAGTTAAAGGCTCTGAAAGAGAATTTGATTTCAAAGTACTTGTATGCATTCACAATGAAGAAAATGTGTATCCAATGATTAACCTTCTACAAGCCACAAAACCAACAAACACATCACCTATTTCAGTCTTTGTTCTACATCTCATGCAATTATCAGGAAGATCAGCTTCTATTAATATAAAAAATGAGTATGCTCGTAATAAATCAAATTCTTATAAACATGCTTCAACTCAAACTATAAGCAATGTGTTTAATACATTACTTTTACATAACAAAGAATGTGTCACATTGAAAGTTTTTACAGCAATTGCACCATATGCTAGCATGCATGATGATATATGCTACATGGCAATGGATACAAAATCAAACATTTTGATTGTGCCATTTCACAAACAATGGTCAATGAATGGGAATGTTGAATTTTCCAATGCTTCAATTAGGTTGGTGAACCAAAGAGTACTAAACAAAGCTCCATGTTCCATCGGCGTCTTAATCGACCGAAGCCAAATGAGTGGAGAATTACTAGTTATACACAATAAGTGTTTTTGTAAAATTGCTATGATATTCTTAGGAGGCGCAGATGATCAAGAGGCTTTGGCTTATGGTATGCGTATCGCGGAACATCCCAACATAAGACTCACCGTGATTTGGGTGAGATTCAAAAGGCAACAAAAACATTATGGTGTAAAGAATCCTTATGTTGATATGATGGAACATATAAGGTATAGAAGTAACCTTAAAGACAAGGTTTATTTTAAGGAGGAAGTTGTGGAAGATGGTGAAGGAACAACACAAGTTATTCGTATGATGGACAGTATTTTCAATTTAGTTATAGTTGGTAAACACCATTTAGCAAATTCTCCTTGTACTTTGGGATTGACAGAATGGTGTGAACTTCCTGAGCTTGGGCCTGTTGGGAACCTCTTAGCAACATCAGATTTTACATTTTCTGTTTTAGTTGTGCAACAACAACCCTTTGATAATGAATATTTTAGATAA 2367 0.3392 MEEVANRRLDQLTSYGMINNKKVACQYFAREGNKGLWYGDNPLNATTSVLVVQIIVMFSLSRLTHFLLSPFHQTLLIAQIMAGIIAGPLVLGRHNTSYEMLFPAASIMTLATFAEFGMIIYFFKMGVQINYKQIMRIQKHAVIIGVLGHISAIVFGVIVLNIVEMISPLGSEKYGIQGLIIFGSLTSFPVISSLLSEMNILSSEIGRMALSTAMVSDACMWIIYVIILTGVRVMEEKSFKFILQKAVTVFYFGFLYYFLRPLVIWISNRNRKGSDPMTQSHFLLIICILMFIGFFGLILGQPTFMTAFWFGVLLPDGPPLGSILAEKLDTIGSTLILPAYCSISGLRTSVPKILGSKTCYMEVVIIAVYVGKFVGTILPSLHFHIEFWDSFALALIMCCKGLLDLCTFNTLLNSKKIDELSFTLMIYTMVAITGFATLIVYYIYDPSRRYKTYMRKSVKGSEREFDFKVLVCIHNEENVYPMINLLQATKPTNTSPISVFVLHLMQLSGRSASINIKNEYARNKSNSYKHASTQTISNVFNTLLLHNKECVTLKVFTAIAPYASMHDDICYMAMDTKSNILIVPFHKQWSMNGNVEFSNASIRLVNQRVLNKAPCSIGVLIDRSQMSGELLVIHNKCFCKIAMIFLGGADDQEALAYGMRIAEHPNIRLTVIWVRFKRQQKHYGVKNPYVDMMEHIRYRSNLKDKVYFKEEVVEDGEGTTQVIRMMDSIFNLVIVGKHHLANSPCTLGLTEWCELPELGPVGNLLATSDFTFSVLVVQQQPFDNEYFR 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01293 788 Gene3D - 47 452 IPR038770 -
Vifa2g01293 788 Pfam Sodium/hydrogen exchanger family 55 433 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vifa2g01293 788 PANTHER CATION/H + ANTIPORTER 17 780 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01293 Vifa-Chr2 349951053 349953736 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01293 1 784 Antiporter Super Family AT1G06970 35.606 9.79e-165 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01293 K26731 - gmx:100787550 1051.97